Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AL355497.1-201ENST00000406262 551 ntBASIC3.29□□□□□ -1.88
RTP1P59025 RNU6-1077P-201ENST00000410506 102 ntBASIC3.29□□□□□ -1.88
RTP1P59025 AC112771.1-201ENST00000463581 102 ntBASIC3.29□□□□□ -1.88
RTP1P59025 SCARNA8-201ENST00000515924 131 ntBASIC3.29□□□□□ -1.88
RTP1P59025 RNA5SP385-201ENST00000515947 110 ntBASIC3.29□□□□□ -1.88
RTP1P59025 AC079600.2-201ENST00000550076 130 ntBASIC3.29□□□□□ -1.88
RTP1P59025 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.29□□□□□ -1.88
RTP1P59025 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTP1P59025 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTP1P59025 AC110774.1-201ENST00000623567 2018 ntBASIC3.29□□□□□ -1.88
RTP1P59025 AC069528.2-201ENST00000624849 1991 ntBASIC3.29□□□□□ -1.88
RTP1P59025 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTP1P59025 AC093010.3-201ENST00000570269 15214 ntBASIC3.28□□□□□ -1.88
RTP1P59025 Y_RNA.24-201ENST00000362508 103 ntBASIC3.28□□□□□ -1.88
RTP1P59025 U3.8-201ENST00000363675 217 ntBASIC3.28□□□□□ -1.88
RTP1P59025 RNU6-899P-201ENST00000363947 107 ntBASIC3.28□□□□□ -1.88
RTP1P59025 RNU1-57P-201ENST00000384491 166 ntBASIC3.28□□□□□ -1.88
RTP1P59025 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.28□□□□□ -1.88
RTP1P59025 UQCRHP3-201ENST00000451503 251 ntBASIC3.28□□□□□ -1.88
RTP1P59025 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.28□□□□□ -1.88
RTP1P59025 RN7SKP43-201ENST00000516173 320 ntBASIC3.28□□□□□ -1.88
RTP1P59025 RNU6-453P-201ENST00000516819 85 ntBASIC3.28□□□□□ -1.88
RTP1P59025 HSPE1P18-201ENST00000517602 280 ntBASIC3.28□□□□□ -1.88
RTP1P59025 AC022616.8-201ENST00000533569 253 ntBASIC3.28□□□□□ -1.88
RTP1P59025 AC025281.1-201ENST00000567026 265 ntBASIC3.28□□□□□ -1.88
RTP1P59025 MIR548X2-201ENST00000579776 100 ntBASIC3.28□□□□□ -1.88
RTP1P59025 AC006111.3-201ENST00000622137 383 ntBASIC3.28□□□□□ -1.88
RTP1P59025 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTP1P59025 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
RTP1P59025 AC010332.2-201ENST00000613083 1904 ntBASIC3.27□□□□□ -1.89
RTP1P59025 Y_RNA.81-201ENST00000362997 102 ntBASIC3.27□□□□□ -1.89
RTP1P59025 Y_RNA.310-201ENST00000365063 113 ntBASIC3.27□□□□□ -1.89
RTP1P59025 Y_RNA.341-201ENST00000365341 102 ntBASIC3.27□□□□□ -1.89
RTP1P59025 SNORA70B-201ENST00000384210 135 ntBASIC3.27□□□□□ -1.89
RTP1P59025 Y_RNA.456-201ENST00000384232 111 ntBASIC3.27□□□□□ -1.89
RTP1P59025 MIR548B-201ENST00000385247 97 ntBASIC3.27□□□□□ -1.89
RTP1P59025 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.27□□□□□ -1.89
RTP1P59025 RNU6-855P-201ENST00000410395 104 ntBASIC3.27□□□□□ -1.89
RTP1P59025 RN7SL75P-201ENST00000461926 281 ntBASIC3.27□□□□□ -1.89
RTP1P59025 RN7SL633P-201ENST00000488974 297 ntBASIC3.27□□□□□ -1.89
RTP1P59025 RNU1-41P-201ENST00000516161 162 ntBASIC3.27□□□□□ -1.89
RTP1P59025 RNU1-48P-201ENST00000516400 162 ntBASIC3.27□□□□□ -1.89
RTP1P59025 SNORD59.2-201ENST00000516873 68 ntBASIC3.27□□□□□ -1.89
RTP1P59025 AC026241.1-201ENST00000517873 2142 ntBASIC3.27□□□□□ -1.89
RTP1P59025 MIR4506-201ENST00000584693 77 ntBASIC3.27□□□□□ -1.89
RTP1P59025 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RTP1P59025 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTP1P59025 AC103988.1-201ENST00000566382 2177 ntBASIC3.27□□□□□ -1.89
RTP1P59025 RNA5SP252-201ENST00000391131 119 ntBASIC3.26□□□□□ -1.89
RTP1P59025 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.26□□□□□ -1.89
RTP1P59025 AL365496.1-201ENST00000426885 215 ntBASIC3.26□□□□□ -1.89
RTP1P59025 AC244505.4-201ENST00000434905 287 ntBASIC3.26□□□□□ -1.89
RTP1P59025 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.26□□□□□ -1.89
RTP1P59025 SSXP5-201ENST00000443473 287 ntBASIC3.26□□□□□ -1.89
RTP1P59025 RNU7-141P-201ENST00000459304 62 ntBASIC3.26□□□□□ -1.89
RTP1P59025 RPL36AP48-201ENST00000485521 314 ntBASIC3.26□□□□□ -1.89
RTP1P59025 AC107027.2-201ENST00000512197 115 ntBASIC3.26□□□□□ -1.89
RTP1P59025 AC109810.1-201ENST00000534066 224 ntBASIC3.26□□□□□ -1.89
RTP1P59025 Y_RNA.802-201ENST00000614892 130 ntBASIC3.26□□□□□ -1.89
RTP1P59025 MIR7843-201ENST00000622274 79 ntBASIC3.26□□□□□ -1.89
RTP1P59025 AC008873.1-201ENST00000625051 138 ntBASIC3.26□□□□□ -1.89
RTP1P59025 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTP1P59025 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RTP1P59025 RNU4-11P-201ENST00000365287 132 ntBASIC3.25□□□□□ -1.89
RTP1P59025 SNORA9.2-201ENST00000365361 133 ntBASIC3.25□□□□□ -1.89
RTP1P59025 RNU6-969P-201ENST00000383900 105 ntBASIC3.25□□□□□ -1.89
RTP1P59025 MIR887-201ENST00000401258 79 ntBASIC3.25□□□□□ -1.89
RTP1P59025 RN7SKP123-201ENST00000410732 291 ntBASIC3.25□□□□□ -1.89
RTP1P59025 UBL5P3-201ENST00000475112 231 ntBASIC3.25□□□□□ -1.89
RTP1P59025 AC008413.1-201ENST00000511864 177 ntBASIC3.25□□□□□ -1.89
RTP1P59025 SNORA31.1-201ENST00000515993 133 ntBASIC3.25□□□□□ -1.89
RTP1P59025 SNORA31.5-201ENST00000516190 133 ntBASIC3.25□□□□□ -1.89
RTP1P59025 AC079598.5-201ENST00000547460 117 ntBASIC3.25□□□□□ -1.89
RTP1P59025 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.25□□□□□ -1.89
RTP1P59025 DNAJC19P2-201ENST00000593340 302 ntBASIC3.25□□□□□ -1.89
RTP1P59025 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.25□□□□□ -1.89
RTP1P59025 MIR3658-201ENST00000636291 56 ntBASIC3.25□□□□□ -1.89
RTP1P59025 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTP1P59025 SNORA40-201ENST00000388090 126 ntBASIC3.24□□□□□ -1.89
RTP1P59025 MIR526A2-201ENST00000390198 65 ntBASIC3.24□□□□□ -1.89
RTP1P59025 SNORA25.12-201ENST00000516202 82 ntBASIC3.24□□□□□ -1.89
RTP1P59025 RNU6-1007P-201ENST00000516586 107 ntBASIC3.24□□□□□ -1.89
RTP1P59025 AL590808.1-201ENST00000618696 141 ntBASIC3.24□□□□□ -1.89
RTP1P59025 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RTP1P59025 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTP1P59025 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTP1P59025 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RTP1P59025 RNU6-1305P-201ENST00000364353 104 ntBASIC3.23□□□□□ -1.89
RTP1P59025 MIR616-201ENST00000385293 97 ntBASIC3.23□□□□□ -1.89
RTP1P59025 MTND4LP9-201ENST00000427694 174 ntBASIC3.23□□□□□ -1.89
RTP1P59025 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.23□□□□□ -1.89
RTP1P59025 AL513328.1-201ENST00000446460 224 ntBASIC3.23□□□□□ -1.89
RTP1P59025 AC245047.8-201ENST00000456455 284 ntBASIC3.23□□□□□ -1.89
RTP1P59025 SRIP1-201ENST00000489235 288 ntBASIC3.23□□□□□ -1.89
RTP1P59025 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.23□□□□□ -1.89
RTP1P59025 SNORA31.21-201ENST00000517180 77 ntBASIC3.23□□□□□ -1.89
RTP1P59025 RNU6-711P-201ENST00000517255 106 ntBASIC3.23□□□□□ -1.89
RTP1P59025 AC025754.2-201ENST00000606491 432 ntBASIC3.23□□□□□ -1.89
RTP1P59025 uc_338.14-201ENST00000613162 166 ntBASIC3.23□□□□□ -1.89
RTP1P59025 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms