Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNA5SP493-201ENST00000364115 91 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 Y_RNA.230-201ENST00000364348 109 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 Y_RNA.439-201ENST00000384119 94 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 RNU6-1160P-201ENST00000384546 104 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 RNA5SP465-201ENST00000391195 109 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 SNORD23.1-201ENST00000408212 104 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 SNORA11.4-201ENST00000408823 129 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 RNA5SP475-201ENST00000410568 110 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 RN7SKP192-201ENST00000411291 327 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.95□□□□□ -2.1
CLDN20P56880 AC008134.1-201ENST00000420943 193 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 RPS29P21-201ENST00000496272 170 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 RNA5SP200-201ENST00000516360 103 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 RNU6-764P-201ENST00000516396 105 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 MIR3169-201ENST00000578032 83 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 AL353621.2-201ENST00000605340 133 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 MIR6132-201ENST00000622083 109 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 AL159152.1-201ENST00000635019 2587 ntBASIC1.95□□□□□ -2.1
CLDN20P56880 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 MIR606-201ENST00000384851 96 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 AL079342.1-201ENST00000401460 267 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 AL023284.1-201ENST00000403956 276 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 AL353689.1-201ENST00000438895 199 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 IPO7P1-201ENST00000442031 636 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 SCARNA16.3-201ENST00000516595 184 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 AP002001.1-203ENST00000534002 267 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 MIR4529-201ENST00000578110 78 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 MIR3684-201ENST00000579779 74 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 MIR4648-201ENST00000580107 72 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 MIR4298-201ENST00000584380 73 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 AC005176.2-201ENST00000596933 147 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 AL355297.3-201ENST00000604082 446 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 PART1_1.1-201ENST00000611761 217 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 AC099654.10-201ENST00000640395 161 ntBASIC1.94□□□□□ -2.1
CLDN20P56880 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLDN20P56880 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLDN20P56880 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLDN20P56880 RNU6-626P-201ENST00000363354 107 ntBASIC1.93□□□□□ -2.1
CLDN20P56880 RNU6-20P-201ENST00000384106 107 ntBASIC1.93□□□□□ -2.1
CLDN20P56880 Y_RNA.462-201ENST00000384268 102 ntBASIC1.93□□□□□ -2.1
CLDN20P56880 AL355497.1-201ENST00000406262 551 ntBASIC1.93□□□□□ -2.1
CLDN20P56880 MIR1283-2-201ENST00000408621 87 ntBASIC1.93□□□□□ -2.1
CLDN20P56880 AC025647.1-201ENST00000517879 253 ntBASIC1.93□□□□□ -2.1
CLDN20P56880 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.93□□□□□ -2.1
CLDN20P56880 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.93□□□□□ -2.1
CLDN20P56880 AL021879.1-201ENST00000611756 288 ntBASIC1.93□□□□□ -2.1
CLDN20P56880 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLDN20P56880 RNU6-1266P-201ENST00000362794 105 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 Y_RNA.152-201ENST00000363578 100 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 SNORA72.2-201ENST00000365028 127 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLDN20P56880 RNU11-3P-201ENST00000391111 133 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 RNU6-130P-201ENST00000411112 103 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 AC113618.1-201ENST00000416747 285 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 AC060773.1-201ENST00000421698 310 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 AC005002.2-201ENST00000438228 269 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 AC073910.1-201ENST00000445047 438 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 ATP5J2P3-201ENST00000451550 258 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 SCARNA15.1-201ENST00000516384 125 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 SUMO2P18-201ENST00000518873 252 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.92□□□□□ -2.1
CLDN20P56880 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.92□□□□□ -2.1
CLDN20P56880 MIR4423-201ENST00000580922 80 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 RAC1P9-201ENST00000604990 392 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 AC006001.4-201ENST00000622243 395 ntBASIC1.92□□□□□ -2.1
CLDN20P56880 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLDN20P56880 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLDN20P56880 AC131280.1-202ENST00000624067 4211 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 Y_RNA.145-201ENST00000363527 102 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 Y_RNA.153-201ENST00000363615 91 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 Y_RNA.183-201ENST00000363882 113 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 RNU6-454P-201ENST00000364292 107 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 SNORA63C-201ENST00000364578 129 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 Y_RNA.276-201ENST00000364732 109 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 RNU6-1240P-201ENST00000365155 104 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 RNU6-738P-201ENST00000384531 106 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 RNU5A-5P-201ENST00000411054 116 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 AC016909.1-201ENST00000415916 166 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 AL390729.2-201ENST00000416137 156 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.91□□□□□ -2.1
CLDN20P56880 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
CLDN20P56880 AC011406.1-201ENST00000512440 370 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 RNU6-397P-201ENST00000516226 104 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 RNU6-1146P-201ENST00000516282 102 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 Y_RNA.720-201ENST00000517166 92 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 RNU2-19P-201ENST00000517288 84 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.91□□□□□ -2.1
CLDN20P56880 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
CLDN20P56880 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms