Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
PER3P56645 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.82-201ENST00000363000 102 ntBASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.92-201ENST00000363043 102 ntBASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.235-201ENST00000364412 102 ntBASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.306-201ENST00000365015 102 ntBASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.312-201ENST00000365089 102 ntBASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.322-201ENST00000365151 102 ntBASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.332-201ENST00000365271 113 ntBASIC2.68□□□□□ -1.98
PER3P56645 MIR592-201ENST00000384959 97 ntBASIC2.68□□□□□ -1.98
PER3P56645 MIR561-201ENST00000385216 97 ntBASIC2.68□□□□□ -1.98
PER3P56645 AL355796.1-201ENST00000406706 323 ntBASIC2.68□□□□□ -1.98
PER3P56645 RNA5SP274-201ENST00000410484 108 ntBASIC2.68□□□□□ -1.98
PER3P56645 RNU2-61P-201ENST00000411069 191 ntBASIC2.68□□□□□ -1.98
PER3P56645 RNU2-64P-201ENST00000411315 191 ntBASIC2.68□□□□□ -1.98
PER3P56645 RNU6-57P-201ENST00000411348 103 ntBASIC2.68□□□□□ -1.98
PER3P56645 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
PER3P56645 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.68□□□□□ -1.98
PER3P56645 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.68□□□□□ -1.98
PER3P56645 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
PER3P56645 AC087499.2-201ENST00000432861 149 ntBASIC2.68□□□□□ -1.98
PER3P56645 Z98949.2-201ENST00000440996 144 ntBASIC2.68□□□□□ -1.98
PER3P56645 MTCO1P44-201ENST00000441935 243 ntBASIC2.68□□□□□ -1.98
PER3P56645 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.650-201ENST00000459002 102 ntBASIC2.68□□□□□ -1.98
PER3P56645 AC010531.2-201ENST00000465012 153 ntBASIC2.68□□□□□ -1.98
PER3P56645 UBL5P3-201ENST00000475112 231 ntBASIC2.68□□□□□ -1.98
PER3P56645 TRBV12-1-201ENST00000479785 344 ntBASIC2.68□□□□□ -1.98
PER3P56645 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.68□□□□□ -1.98
PER3P56645 SNORD116-28-201ENST00000516123 91 ntBASIC2.68□□□□□ -1.98
PER3P56645 RNU6-826P-201ENST00000516827 104 ntBASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.777-201ENST00000516982 102 ntBASIC2.68□□□□□ -1.98
PER3P56645 AL512605.2-201ENST00000592972 256 ntBASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.771-201ENST00000598668 102 ntBASIC2.68□□□□□ -1.98
PER3P56645 Y_RNA.789-201ENST00000622480 102 ntBASIC2.68□□□□□ -1.98
PER3P56645 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.68□□□□□ -1.98
PER3P56645 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PER3P56645 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PER3P56645 RNU6-1180P-201ENST00000364935 107 ntBASIC2.67□□□□□ -1.98
PER3P56645 RNU6-438P-201ENST00000365561 103 ntBASIC2.67□□□□□ -1.98
PER3P56645 AL357139.1-201ENST00000407792 426 ntBASIC2.67□□□□□ -1.98
PER3P56645 AL121890.1-201ENST00000435457 205 ntBASIC2.67□□□□□ -1.98
PER3P56645 SNORD2.1-201ENST00000458762 69 ntBASIC2.67□□□□□ -1.98
PER3P56645 AC114982.1-201ENST00000469402 321 ntBASIC2.67□□□□□ -1.98
PER3P56645 RNU6-991P-201ENST00000516168 107 ntBASIC2.67□□□□□ -1.98
PER3P56645 RNU6-667P-201ENST00000517186 102 ntBASIC2.67□□□□□ -1.98
PER3P56645 RN7SKP40-201ENST00000517211 242 ntBASIC2.67□□□□□ -1.98
PER3P56645 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PER3P56645 AC080100.1-201ENST00000624239 5356 ntBASIC2.67□□□□□ -1.98
PER3P56645 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PER3P56645 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
PER3P56645 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PER3P56645 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PER3P56645 Y_RNA.292-201ENST00000364904 97 ntBASIC2.66□□□□□ -1.98
PER3P56645 RNY4P28-201ENST00000365281 93 ntBASIC2.66□□□□□ -1.98
PER3P56645 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PER3P56645 MIR1298-201ENST00000408783 112 ntBASIC2.66□□□□□ -1.98
PER3P56645 AC016909.1-201ENST00000415916 166 ntBASIC2.66□□□□□ -1.98
PER3P56645 AL109933.2-201ENST00000452651 260 ntBASIC2.66□□□□□ -1.98
PER3P56645 SNORD65B-201ENST00000459126 73 ntBASIC2.66□□□□□ -1.98
PER3P56645 YWHAEP4-201ENST00000505390 198 ntBASIC2.66□□□□□ -1.98
PER3P56645 RNU6-948P-201ENST00000516374 107 ntBASIC2.66□□□□□ -1.98
PER3P56645 AC025647.1-201ENST00000517879 253 ntBASIC2.66□□□□□ -1.98
PER3P56645 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.66□□□□□ -1.98
PER3P56645 AC025754.2-201ENST00000606491 432 ntBASIC2.66□□□□□ -1.98
PER3P56645 snoU18.1-201ENST00000629629 71 ntBASIC2.66□□□□□ -1.98
PER3P56645 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
PER3P56645 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PER3P56645 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PER3P56645 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PER3P56645 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
PER3P56645 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PER3P56645 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.65□□□□□ -1.99
PER3P56645 Y_RNA.124-201ENST00000363339 93 ntBASIC2.65□□□□□ -1.99
PER3P56645 Y_RNA.200-201ENST00000364018 102 ntBASIC2.65□□□□□ -1.99
PER3P56645 RNU6-801P-201ENST00000364087 105 ntBASIC2.65□□□□□ -1.99
PER3P56645 SNORA9.2-201ENST00000365361 133 ntBASIC2.65□□□□□ -1.99
PER3P56645 SNORA25B-201ENST00000365507 128 ntBASIC2.65□□□□□ -1.99
PER3P56645 RNU1-109P-201ENST00000383960 147 ntBASIC2.65□□□□□ -1.99
PER3P56645 SNORA20B-201ENST00000384220 132 ntBASIC2.65□□□□□ -1.99
PER3P56645 RNU6-1235P-201ENST00000384559 107 ntBASIC2.65□□□□□ -1.99
PER3P56645 AC123900.1-201ENST00000420390 96 ntBASIC2.65□□□□□ -1.99
PER3P56645 AC104389.3-201ENST00000445629 235 ntBASIC2.65□□□□□ -1.99
PER3P56645 AL137159.1-201ENST00000452808 512 ntBASIC2.65□□□□□ -1.99
PER3P56645 RNU6-498P-201ENST00000459468 107 ntBASIC2.65□□□□□ -1.99
PER3P56645 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PER3P56645 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.65□□□□□ -1.99
PER3P56645 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.65□□□□□ -1.99
PER3P56645 AC079600.2-201ENST00000550076 130 ntBASIC2.65□□□□□ -1.99
PER3P56645 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.65□□□□□ -1.99
PER3P56645 Y_RNA.590-201ENST00000410140 107 ntBASIC2.64□□□□□ -1.99
PER3P56645 Y_RNA.626-201ENST00000411288 95 ntBASIC2.64□□□□□ -1.99
PER3P56645 AL451074.5-201ENST00000415894 435 ntBASIC2.64□□□□□ -1.99
PER3P56645 RPS29P6-201ENST00000438196 145 ntBASIC2.64□□□□□ -1.99
PER3P56645 Y_RNA.638-201ENST00000459374 113 ntBASIC2.64□□□□□ -1.99
PER3P56645 Y_RNA.637-201ENST00000459424 114 ntBASIC2.64□□□□□ -1.99
PER3P56645 AC004486.1-201ENST00000546846 233 ntBASIC2.64□□□□□ -1.99
PER3P56645 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PER3P56645 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.64□□□□□ -1.99
PER3P56645 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms