Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 RNU6-1305P-201ENST00000364353 104 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 Y_RNA.315-201ENST00000365117 102 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 RNU6-1040P-201ENST00000383974 107 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 RNU6-793P-201ENST00000384233 104 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
EFNA3P52797 RNU1-139P-201ENST00000391307 165 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 AL033519.2-201ENST00000403958 392 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 RNU6-1156P-201ENST00000410365 100 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.46□□□□□ -2.18
EFNA3P52797 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 AC099799.1-201ENST00000439809 192 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 SNORA31.17-201ENST00000516953 127 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 AC144568.1-201ENST00000520139 137 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.46□□□□□ -2.18
EFNA3P52797 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.46□□□□□ -2.18
EFNA3P52797 AC022254.1-201ENST00000567857 235 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 AL117336.2-201ENST00000602435 335 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.46□□□□□ -2.18
EFNA3P52797 AL078596.1-201ENST00000624856 447 ntBASIC1.46□□□□□ -2.18
EFNA3P52797 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
EFNA3P52797 RNU4-79P-201ENST00000362764 141 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 Y_RNA.238-201ENST00000364441 102 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 Y_RNA.358-201ENST00000365491 99 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 MIR10B-201ENST00000385011 110 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 SNORA69.1-201ENST00000390904 137 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 Y_RNA.605-201ENST00000410577 105 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 AC009310.1-201ENST00000414414 451 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 AC114482.1-201ENST00000418010 247 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.45□□□□□ -2.18
EFNA3P52797 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.45□□□□□ -2.18
EFNA3P52797 AC099677.2-201ENST00000436385 175 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 ATP5J2P3-201ENST00000451550 258 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 AC027575.1-201ENST00000481064 460 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.45□□□□□ -2.18
EFNA3P52797 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.45□□□□□ -2.18
EFNA3P52797 RNU6-1170P-201ENST00000515974 106 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 RNU6-970P-201ENST00000516312 107 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 MIR2355-201ENST00000517199 87 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 AC093023.1-201ENST00000547375 507 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 AC103810.8-201ENST00000607347 118 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 AC010999.1-201ENST00000611856 324 ntBASIC1.45□□□□□ -2.18
EFNA3P52797 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
EFNA3P52797 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
EFNA3P52797 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.44□□□□□ -2.18
EFNA3P52797 AC073544.1-201ENST00000600110 1595 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 RNU6-879P-201ENST00000364328 108 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 Y_RNA.314-201ENST00000365114 102 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.44□□□□□ -2.18
EFNA3P52797 Y_RNA.428-201ENST00000384078 102 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 MIR586-201ENST00000385035 97 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 AP1B1P2-201ENST00000416196 106 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 AC060773.1-201ENST00000421698 310 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 RNU7-152P-201ENST00000458982 64 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 RNU7-95P-201ENST00000459222 64 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 AL163540.1-201ENST00000485382 386 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 RNU6-120P-201ENST00000516077 103 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 RNU6-948P-201ENST00000516374 107 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 Y_RNA.683-201ENST00000516508 93 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 RNU2-34P-201ENST00000516534 121 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 AC022868.1-201ENST00000517767 391 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 CYCSP23-201ENST00000519781 313 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.44□□□□□ -2.18
EFNA3P52797 SUB1P4-201ENST00000566062 339 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 MIR4285-201ENST00000581001 85 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 AC080078.3-201ENST00000605407 463 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 BX248123.2-201ENST00000606318 124 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 AC104985.2-201ENST00000620598 500 ntBASIC1.44□□□□□ -2.18
EFNA3P52797 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
EFNA3P52797 RNU6-727P-201ENST00000363592 107 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 RNU6-281P-201ENST00000384212 103 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 Y_RNA.557-201ENST00000384680 107 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 EIF1P2-201ENST00000428233 350 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.43□□□□□ -2.18
EFNA3P52797 AC091179.3-201ENST00000474761 144 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 HMGN2P9-201ENST00000476875 229 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 AC105758.1-201ENST00000506038 399 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 RNU6-699P-201ENST00000517081 110 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 SNORD116.3-201ENST00000517176 78 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.43□□□□□ -2.18
EFNA3P52797 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.43□□□□□ -2.18
EFNA3P52797 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.43□□□□□ -2.18
EFNA3P52797 MIR4781-201ENST00000585250 76 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 AL512598.1-201ENST00000610158 273 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 AC006001.4-201ENST00000622243 395 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 AC068205.3-201ENST00000636385 468 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 MTND5P35-201ENST00000557537 1720 ntBASIC1.43□□□□□ -2.18
EFNA3P52797 RNU6-874P-201ENST00000362390 105 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 RNU6-797P-201ENST00000363101 109 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 RNU6-112P-201ENST00000363599 104 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 RNU1-96P-201ENST00000364163 162 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 RNA5SP363-201ENST00000365072 115 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 RNU6-975P-201ENST00000384296 105 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 RNU6-1235P-201ENST00000384559 107 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 MIR559-201ENST00000385188 96 ntBASIC1.42□□□□□ -2.18
EFNA3P52797 MIR628-201ENST00000385229 95 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms