Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SNORA63.7-201ENST00000365579 123 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 RNU6-418P-201ENST00000384035 107 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 Y_RNA.498-201ENST00000384460 102 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 MRPL35P1-201ENST00000404272 572 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 AL512604.1-201ENST00000404812 257 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 MIR1261-201ENST00000408659 82 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 RNU2-20P-201ENST00000410425 191 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.07□□□□□ -2.08
CLCNKAP51800 RAB28P5-201ENST00000427490 651 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 MTND5P22-201ENST00000458380 195 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 AC010531.2-201ENST00000465012 153 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 MRPS35P2-201ENST00000508242 191 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 AC074133.1-201ENST00000515696 183 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 RNU6-1045P-201ENST00000516321 107 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 RNU6-897P-201ENST00000517135 105 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 CYCSP23-201ENST00000519781 313 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.07□□□□□ -2.08
CLCNKAP51800 AL109918.3-201ENST00000603072 338 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 AL355297.3-201ENST00000604082 446 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 AC005034.5-201ENST00000604219 466 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 AC091932.3-201ENST00000624223 323 ntBASIC2.07□□□□□ -2.08
CLCNKAP51800 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CLCNKAP51800 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CLCNKAP51800 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CLCNKAP51800 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CLCNKAP51800 MIR340-201ENST00000362125 95 ntBASIC2.06□□□□□ -2.08
CLCNKAP51800 SNORD115-3-201ENST00000363100 82 ntBASIC2.06□□□□□ -2.08
CLCNKAP51800 SNORA16B-201ENST00000364674 135 ntBASIC2.06□□□□□ -2.08
CLCNKAP51800 Y_RNA.439-201ENST00000384119 94 ntBASIC2.06□□□□□ -2.08
CLCNKAP51800 AC139712.2-201ENST00000424302 339 ntBASIC2.06□□□□□ -2.08
CLCNKAP51800 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
CLCNKAP51800 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLCNKAP51800 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
CLCNKAP51800 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.06□□□□□ -2.08
CLCNKAP51800 Y_RNA.772-201ENST00000606692 102 ntBASIC2.06□□□□□ -2.08
CLCNKAP51800 AL627230.6-201ENST00000611129 280 ntBASIC2.06□□□□□ -2.08
CLCNKAP51800 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.06□□□□□ -2.08
CLCNKAP51800 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLCNKAP51800 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.06□□□□□ -2.08
CLCNKAP51800 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLCNKAP51800 SNORD114-1-201ENST00000362705 72 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 Y_RNA.143-201ENST00000363520 106 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 U3.8-201ENST00000363675 217 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.05□□□□□ -2.08
CLCNKAP51800 RNU6-20P-201ENST00000384106 107 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 RNU6-975P-201ENST00000384296 105 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 RNU6-937P-201ENST00000384325 106 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 SNORD14D-201ENST00000384390 87 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 SRIP3-201ENST00000413200 219 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 AC123900.1-201ENST00000420390 96 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 ELOCP20-201ENST00000422460 345 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 AC005002.2-201ENST00000438228 269 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.05□□□□□ -2.08
CLCNKAP51800 RNU7-57P-201ENST00000459540 60 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 YWHAEP4-201ENST00000505390 198 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.05□□□□□ -2.08
CLCNKAP51800 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.05□□□□□ -2.08
CLCNKAP51800 AC136932.1-201ENST00000574771 208 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
CLCNKAP51800 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLCNKAP51800 AC009487.4-201ENST00000624969 3585 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 Y_RNA.26-201ENST00000362539 101 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 Y_RNA.105-201ENST00000363182 111 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 RNU6-626P-201ENST00000363354 107 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 Y_RNA.214-201ENST00000364201 112 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 RNU6-806P-201ENST00000365147 105 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 RNU6-1264P-201ENST00000383891 107 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 HMGN2P39-201ENST00000398005 273 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 MIR548F4-201ENST00000408515 105 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 RNU6-57P-201ENST00000411348 103 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.04□□□□□ -2.08
CLCNKAP51800 MTCO1P44-201ENST00000441935 243 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.04□□□□□ -2.08
CLCNKAP51800 AC114982.1-201ENST00000469402 321 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 MRPS17P9-201ENST00000511924 393 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.04□□□□□ -2.08
CLCNKAP51800 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 AL031274.2-201ENST00000599419 203 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.04□□□□□ -2.08
CLCNKAP51800 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLCNKAP51800 Y_RNA.99-201ENST00000363138 105 ntBASIC2.03□□□□□ -2.08
CLCNKAP51800 RNU6-1309P-201ENST00000363305 108 ntBASIC2.03□□□□□ -2.08
CLCNKAP51800 RPL21P1-201ENST00000399532 476 ntBASIC2.03□□□□□ -2.08
CLCNKAP51800 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.03□□□□□ -2.08
CLCNKAP51800 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.03□□□□□ -2.08
CLCNKAP51800 AC073910.1-201ENST00000445047 438 ntBASIC2.03□□□□□ -2.08
CLCNKAP51800 snoU13.26-201ENST00000459452 105 ntBASIC2.03□□□□□ -2.08
CLCNKAP51800 RNY3P15-201ENST00000516297 97 ntBASIC2.03□□□□□ -2.08
CLCNKAP51800 RNU6-635P-201ENST00000516651 102 ntBASIC2.03□□□□□ -2.08
CLCNKAP51800 SNORA40.15-201ENST00000516884 107 ntBASIC2.03□□□□□ -2.08
CLCNKAP51800 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.03□□□□□ -2.08
CLCNKAP51800 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.03□□□□□ -2.08
CLCNKAP51800 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.03□□□□□ -2.08
CLCNKAP51800 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.03□□□□□ -2.08
CLCNKAP51800 MIR3674-201ENST00000636576 68 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms