Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.12□□□□□ -2.07
CENPAP49450 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.12□□□□□ -2.07
CENPAP49450 AC073910.1-201ENST00000445047 438 ntBASIC2.12□□□□□ -2.07
CENPAP49450 AL357134.1-201ENST00000445848 426 ntBASIC2.12□□□□□ -2.07
CENPAP49450 RNU6-635P-201ENST00000516651 102 ntBASIC2.12□□□□□ -2.07
CENPAP49450 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.12□□□□□ -2.07
CENPAP49450 AC008269.2-201ENST00000561915 1105 ntBASIC2.12□□□□□ -2.07
CENPAP49450 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.12□□□□□ -2.07
CENPAP49450 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.12□□□□□ -2.07
CENPAP49450 MIR376A1-201ENST00000616574 68 ntBASIC2.12□□□□□ -2.07
CENPAP49450 AL590240.4-201ENST00000616908 390 ntBASIC2.12□□□□□ -2.07
CENPAP49450 AL159152.1-201ENST00000635019 2587 ntBASIC2.11□□□□□ -2.07
CENPAP49450 AC062016.1-201ENST00000355719 319 ntBASIC2.11□□□□□ -2.07
CENPAP49450 Y_RNA.19-201ENST00000362462 99 ntBASIC2.11□□□□□ -2.07
CENPAP49450 RNU6-1266P-201ENST00000362794 105 ntBASIC2.11□□□□□ -2.07
CENPAP49450 RNU6-23P-201ENST00000363283 107 ntBASIC2.11□□□□□ -2.07
CENPAP49450 RNA5SP68-201ENST00000363885 119 ntBASIC2.11□□□□□ -2.07
CENPAP49450 RNU6-770P-201ENST00000363929 105 ntBASIC2.11□□□□□ -2.07
CENPAP49450 Y_RNA.214-201ENST00000364201 112 ntBASIC2.11□□□□□ -2.07
CENPAP49450 SNORD114-6-201ENST00000364393 72 ntBASIC2.11□□□□□ -2.07
CENPAP49450 HMGN2P39-201ENST00000398005 273 ntBASIC2.11□□□□□ -2.07
CENPAP49450 AC008413.1-201ENST00000511864 177 ntBASIC2.11□□□□□ -2.07
CENPAP49450 RNU7-110P-201ENST00000516891 62 ntBASIC2.11□□□□□ -2.07
CENPAP49450 AP002001.1-203ENST00000534002 267 ntBASIC2.11□□□□□ -2.07
CENPAP49450 AC055872.1-201ENST00000570978 278 ntBASIC2.11□□□□□ -2.07
CENPAP49450 AC006380.1-201ENST00000603598 186 ntBASIC2.11□□□□□ -2.07
CENPAP49450 AC011373.1-201ENST00000607270 237 ntBASIC2.11□□□□□ -2.07
CENPAP49450 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.11□□□□□ -2.07
CENPAP49450 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.11□□□□□ -2.07
CENPAP49450 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.11□□□□□ -2.07
CENPAP49450 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.11□□□□□ -2.07
CENPAP49450 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.11□□□□□ -2.07
CENPAP49450 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CENPAP49450 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.11□□□□□ -2.07
CENPAP49450 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CENPAP49450 MIR340-201ENST00000362125 95 ntBASIC2.1□□□□□ -2.07
CENPAP49450 Y_RNA.230-201ENST00000364348 109 ntBASIC2.1□□□□□ -2.07
CENPAP49450 RNU6-1175P-201ENST00000365200 107 ntBASIC2.1□□□□□ -2.07
CENPAP49450 Y_RNA.462-201ENST00000384268 102 ntBASIC2.1□□□□□ -2.07
CENPAP49450 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CENPAP49450 AC008134.1-201ENST00000420943 193 ntBASIC2.1□□□□□ -2.07
CENPAP49450 AC108938.1-201ENST00000451204 136 ntBASIC2.1□□□□□ -2.07
CENPAP49450 RNU6-221P-201ENST00000459541 99 ntBASIC2.1□□□□□ -2.07
CENPAP49450 RN7SL429P-201ENST00000479090 223 ntBASIC2.1□□□□□ -2.07
CENPAP49450 RN7SL489P-201ENST00000486185 223 ntBASIC2.1□□□□□ -2.07
CENPAP49450 RN7SL327P-201ENST00000488659 223 ntBASIC2.1□□□□□ -2.07
CENPAP49450 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.1□□□□□ -2.07
CENPAP49450 AP005660.1-201ENST00000522972 293 ntBASIC2.1□□□□□ -2.07
CENPAP49450 AC087441.2-201ENST00000529141 262 ntBASIC2.1□□□□□ -2.07
CENPAP49450 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.1□□□□□ -2.07
CENPAP49450 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
CENPAP49450 RN7SL853P-201ENST00000617250 223 ntBASIC2.1□□□□□ -2.07
CENPAP49450 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.1□□□□□ -2.07
CENPAP49450 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CENPAP49450 MIR410-201ENST00000362222 80 ntBASIC2.09□□□□□ -2.07
CENPAP49450 RNU6-1309P-201ENST00000363305 108 ntBASIC2.09□□□□□ -2.07
CENPAP49450 RNA5SP493-201ENST00000364115 91 ntBASIC2.09□□□□□ -2.07
CENPAP49450 RNU6-1164P-201ENST00000364428 107 ntBASIC2.09□□□□□ -2.07
CENPAP49450 Y_RNA.276-201ENST00000364732 109 ntBASIC2.09□□□□□ -2.07
CENPAP49450 RNU6-21P-201ENST00000384710 107 ntBASIC2.09□□□□□ -2.07
CENPAP49450 MIR518C-201ENST00000384822 101 ntBASIC2.09□□□□□ -2.07
CENPAP49450 MIR518A2-201ENST00000384966 87 ntBASIC2.09□□□□□ -2.07
CENPAP49450 SNORA40.19-201ENST00000390846 128 ntBASIC2.09□□□□□ -2.07
CENPAP49450 MIR1253-201ENST00000408273 105 ntBASIC2.09□□□□□ -2.07
CENPAP49450 Y_RNA.602-201ENST00000410535 92 ntBASIC2.09□□□□□ -2.07
CENPAP49450 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.09□□□□□ -2.07
CENPAP49450 BX510359.4-201ENST00000423750 193 ntBASIC2.09□□□□□ -2.07
CENPAP49450 RPS15AP28-201ENST00000435088 386 ntBASIC2.09□□□□□ -2.07
CENPAP49450 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.09□□□□□ -2.07
CENPAP49450 DYNLT3P2-201ENST00000442517 295 ntBASIC2.09□□□□□ -2.07
CENPAP49450 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.09□□□□□ -2.07
CENPAP49450 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.09□□□□□ -2.07
CENPAP49450 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CENPAP49450 RNU6-1143P-201ENST00000516125 104 ntBASIC2.09□□□□□ -2.07
CENPAP49450 RNU6-155P-201ENST00000516347 100 ntBASIC2.09□□□□□ -2.07
CENPAP49450 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
CENPAP49450 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.09□□□□□ -2.07
CENPAP49450 AC136932.1-201ENST00000574771 208 ntBASIC2.09□□□□□ -2.07
CENPAP49450 AC103810.6-201ENST00000606708 136 ntBASIC2.09□□□□□ -2.07
CENPAP49450 AC009487.4-201ENST00000624969 3585 ntBASIC2.09□□□□□ -2.08
CENPAP49450 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CENPAP49450 Y_RNA.64-201ENST00000362845 102 ntBASIC2.08□□□□□ -2.08
CENPAP49450 Y_RNA.101-201ENST00000363154 102 ntBASIC2.08□□□□□ -2.08
CENPAP49450 Y_RNA.176-201ENST00000363815 109 ntBASIC2.08□□□□□ -2.08
CENPAP49450 RNU6-454P-201ENST00000364292 107 ntBASIC2.08□□□□□ -2.08
CENPAP49450 SNORD63-201ENST00000384262 68 ntBASIC2.08□□□□□ -2.08
CENPAP49450 RNU6-713P-201ENST00000384761 107 ntBASIC2.08□□□□□ -2.08
CENPAP49450 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
CENPAP49450 RNU11-3P-201ENST00000391111 133 ntBASIC2.08□□□□□ -2.08
CENPAP49450 RNU6-1109P-201ENST00000391187 107 ntBASIC2.08□□□□□ -2.08
CENPAP49450 RPL21P1-201ENST00000399532 476 ntBASIC2.08□□□□□ -2.08
CENPAP49450 RNU4-30P-201ENST00000410245 143 ntBASIC2.08□□□□□ -2.08
CENPAP49450 AL390729.2-201ENST00000416137 156 ntBASIC2.08□□□□□ -2.08
CENPAP49450 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.08□□□□□ -2.08
CENPAP49450 RNU1-131P-201ENST00000458943 161 ntBASIC2.08□□□□□ -2.08
CENPAP49450 RNU6-856P-201ENST00000516959 98 ntBASIC2.08□□□□□ -2.08
CENPAP49450 AC025647.1-201ENST00000517879 253 ntBASIC2.08□□□□□ -2.08
CENPAP49450 AC027419.1-201ENST00000522976 328 ntBASIC2.08□□□□□ -2.08
CENPAP49450 AL117187.1-201ENST00000555482 181 ntBASIC2.08□□□□□ -2.08
CENPAP49450 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms