Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RNU1-62P-201ENST00000362599 164 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 Y_RNA.105-201ENST00000363182 111 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 RNU6-280P-201ENST00000364145 104 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 Y_RNA.380-201ENST00000365663 111 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 Y_RNA.551-201ENST00000384661 102 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 RPL21P1-201ENST00000399532 476 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 MIR1294-201ENST00000408503 142 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 SNORD12B-201ENST00000410433 91 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC6A12P48065 RNU6-344P-201ENST00000516635 111 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 RNU2-44P-201ENST00000516795 194 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 AC131281.1-201ENST00000522984 164 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.91□□□□□ -2.1
SLC6A12P48065 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SLC6A12P48065 MIR4299-201ENST00000577899 72 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 AC008749.1-201ENST00000597650 306 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 SNRPGP20-201ENST00000604477 205 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 AL162730.1-201ENST00000605734 292 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 AC240442.1-201ENST00000616055 283 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SLC6A12P48065 MTND5P35-201ENST00000557537 1720 ntBASIC1.91□□□□□ -2.1
SLC6A12P48065 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SLC6A12P48065 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
SLC6A12P48065 Y_RNA.26-201ENST00000362539 101 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 RNU6-961P-201ENST00000363893 105 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 Y_RNA.214-201ENST00000364201 112 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 RNU4-50P-201ENST00000364361 141 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 RNU6-234P-201ENST00000365229 104 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 Y_RNA.415-201ENST00000384012 112 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 RNU6-793P-201ENST00000384233 104 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 Y_RNA.459-201ENST00000384251 102 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 Y_RNA.471-201ENST00000384312 102 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 Y_RNA.526-201ENST00000384572 110 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 MIR568-201ENST00000385036 95 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 SNORD78.2-201ENST00000391076 69 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 RNA5SP465-201ENST00000391195 109 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 MRPL35P1-201ENST00000404272 572 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 ELOCP21-201ENST00000412558 336 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SLC6A12P48065 ELOCP20-201ENST00000422460 345 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 HMGN2P3-201ENST00000433603 273 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 HMGN2P5-201ENST00000436882 273 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 MTND2P29-201ENST00000438595 412 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 AC073910.1-201ENST00000445047 438 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC6A12P48065 MRPS35P2-201ENST00000508242 191 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 AC093259.1-201ENST00000509755 300 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 Y_RNA.683-201ENST00000516508 93 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 AC091144.1-201ENST00000519573 138 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 AP002001.1-203ENST00000534002 267 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 RRN3P3-201ENST00000549207 578 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.9□□□□□ -2.11
SLC6A12P48065 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.9□□□□□ -2.11
SLC6A12P48065 MIR4659A-201ENST00000580269 81 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 MIR5006-201ENST00000583027 110 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC6A12P48065 AL121655.1-201ENST00000605811 308 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.9□□□□□ -2.11
SLC6A12P48065 MIR7843-201ENST00000622274 79 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 AC008873.1-201ENST00000625051 138 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.9□□□□□ -2.11
SLC6A12P48065 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SLC6A12P48065 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
SLC6A12P48065 RNU6-1309P-201ENST00000363305 108 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 RNU6-727P-201ENST00000363592 107 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 Y_RNA.179-201ENST00000363844 90 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 Y_RNA.210-201ENST00000364161 110 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 RNU6-1164P-201ENST00000364428 107 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 Y_RNA.276-201ENST00000364732 109 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 RNU6-806P-201ENST00000365147 105 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 SNORA63.7-201ENST00000365579 123 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 RNU6-926P-201ENST00000384075 107 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 RNU11-3P-201ENST00000391111 133 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 RNU6-121P-201ENST00000410525 99 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC6A12P48065 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SLC6A12P48065 MRPS17P9-201ENST00000511924 393 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 SNORA40.9-201ENST00000515895 93 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 MIR514B-201ENST00000516774 80 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 RNU6-897P-201ENST00000517135 105 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 AC055872.1-201ENST00000570978 278 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 AC136932.1-201ENST00000574771 208 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 RPS29P30-201ENST00000600975 111 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
SLC6A12P48065 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SLC6A12P48065 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SLC6A12P48065 Y_RNA.99-201ENST00000363138 105 ntBASIC1.88□□□□□ -2.11
SLC6A12P48065 SNORD87-201ENST00000364849 89 ntBASIC1.88□□□□□ -2.11
SLC6A12P48065 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.88□□□□□ -2.11
SLC6A12P48065 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
SLC6A12P48065 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC6A12P48065 MTND3P2-201ENST00000438452 342 ntBASIC1.88□□□□□ -2.11
SLC6A12P48065 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC6A12P48065 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.88□□□□□ -2.11
SLC6A12P48065 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC6A12P48065 RPL23AP6-201ENST00000446637 472 ntBASIC1.88□□□□□ -2.11
SLC6A12P48065 RNU6-991P-201ENST00000516168 107 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms