Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNU6-256P-201ENST00000516747 97 ntBASIC0.98□□□□□ -2.25
SSR1P43307 RNA5SP54-201ENST00000516951 92 ntBASIC0.98□□□□□ -2.25
SSR1P43307 AC019193.3-201ENST00000609144 554 ntBASIC0.98□□□□□ -2.25
SSR1P43307 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
SSR1P43307 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SSR1P43307 RNU6-451P-201ENST00000362921 107 ntBASIC0.97□□□□□ -2.25
SSR1P43307 SNORD115-8-201ENST00000363856 82 ntBASIC0.97□□□□□ -2.25
SSR1P43307 SNORD115-38-201ENST00000365037 82 ntBASIC0.97□□□□□ -2.25
SSR1P43307 MIR153-2-201ENST00000385225 87 ntBASIC0.97□□□□□ -2.25
SSR1P43307 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SSR1P43307 MTATP6P13-201ENST00000438531 667 ntBASIC0.97□□□□□ -2.25
SSR1P43307 MTND4P18-201ENST00000447010 465 ntBASIC0.97□□□□□ -2.25
SSR1P43307 RPS27P22-201ENST00000478056 241 ntBASIC0.97□□□□□ -2.25
SSR1P43307 AC010469.2-201ENST00000496412 480 ntBASIC0.97□□□□□ -2.25
SSR1P43307 TRBVA-201ENST00000498804 316 ntBASIC0.97□□□□□ -2.25
SSR1P43307 RN7SKP49-201ENST00000516675 260 ntBASIC0.97□□□□□ -2.25
SSR1P43307 CYCSP23-201ENST00000519781 313 ntBASIC0.97□□□□□ -2.25
SSR1P43307 AL137100.2-201ENST00000555786 315 ntBASIC0.97□□□□□ -2.25
SSR1P43307 MIR4438-201ENST00000585271 93 ntBASIC0.97□□□□□ -2.25
SSR1P43307 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SSR1P43307 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
SSR1P43307 RNU6-128P-201ENST00000383976 107 ntBASIC0.96□□□□□ -2.26
SSR1P43307 RNU6-245P-201ENST00000384020 107 ntBASIC0.96□□□□□ -2.26
SSR1P43307 MIR10B-201ENST00000385011 110 ntBASIC0.96□□□□□ -2.26
SSR1P43307 SNORD41-201ENST00000386967 70 ntBASIC0.96□□□□□ -2.26
SSR1P43307 RNU6-159P-201ENST00000391080 106 ntBASIC0.96□□□□□ -2.26
SSR1P43307 RAB28P5-201ENST00000427490 651 ntBASIC0.96□□□□□ -2.26
SSR1P43307 RPS4XP11-201ENST00000446897 772 ntBASIC0.96□□□□□ -2.26
SSR1P43307 RNU7-99P-201ENST00000516271 62 ntBASIC0.96□□□□□ -2.26
SSR1P43307 SNORA70.22-201ENST00000517160 124 ntBASIC0.96□□□□□ -2.26
SSR1P43307 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.96□□□□□ -2.26
SSR1P43307 MIR4653-201ENST00000585107 83 ntBASIC0.96□□□□□ -2.26
SSR1P43307 AL162413.1-201ENST00000603198 110 ntBASIC0.96□□□□□ -2.26
SSR1P43307 DISC2.1-201ENST00000612827 205 ntBASIC0.96□□□□□ -2.26
SSR1P43307 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SSR1P43307 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SSR1P43307 U3.8-201ENST00000363675 217 ntBASIC0.95□□□□□ -2.26
SSR1P43307 RNU6-793P-201ENST00000384233 104 ntBASIC0.95□□□□□ -2.26
SSR1P43307 Y_RNA.473-201ENST00000384333 102 ntBASIC0.95□□□□□ -2.26
SSR1P43307 MIR100-201ENST00000385259 80 ntBASIC0.95□□□□□ -2.26
SSR1P43307 AL606490.4-201ENST00000423117 127 ntBASIC0.95□□□□□ -2.26
SSR1P43307 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.95□□□□□ -2.26
SSR1P43307 AC108729.3-201ENST00000513484 108 ntBASIC0.95□□□□□ -2.26
SSR1P43307 ACA59.1-201ENST00000515966 143 ntBASIC0.95□□□□□ -2.26
SSR1P43307 RNU6-917P-201ENST00000516294 104 ntBASIC0.95□□□□□ -2.26
SSR1P43307 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.95□□□□□ -2.26
SSR1P43307 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.95□□□□□ -2.26
SSR1P43307 AC022432.1-201ENST00000595739 310 ntBASIC0.95□□□□□ -2.26
SSR1P43307 AL359821.1-201ENST00000605519 182 ntBASIC0.95□□□□□ -2.26
SSR1P43307 AC090617.10-201ENST00000624308 134 ntBASIC0.95□□□□□ -2.26
SSR1P43307 AC024614.3-201ENST00000637860 256 ntBASIC0.95□□□□□ -2.26
SSR1P43307 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.95□□□□□ -2.26
SSR1P43307 AC005592.1-201ENST00000566527 1640 ntBASIC0.94□□□□□ -2.26
SSR1P43307 Y_RNA.179-201ENST00000363844 90 ntBASIC0.94□□□□□ -2.26
SSR1P43307 SNORD115-32-201ENST00000364079 82 ntBASIC0.94□□□□□ -2.26
SSR1P43307 RNU4-76P-201ENST00000364509 141 ntBASIC0.94□□□□□ -2.26
SSR1P43307 Y_RNA.405-201ENST00000383979 100 ntBASIC0.94□□□□□ -2.26
SSR1P43307 Y_RNA.451-201ENST00000384200 100 ntBASIC0.94□□□□□ -2.26
SSR1P43307 RNU6-17P-201ENST00000384245 107 ntBASIC0.94□□□□□ -2.26
SSR1P43307 RNU6-18P-201ENST00000384527 107 ntBASIC0.94□□□□□ -2.26
SSR1P43307 Y_RNA.524-201ENST00000384564 100 ntBASIC0.94□□□□□ -2.26
SSR1P43307 RNU6-950P-201ENST00000384651 107 ntBASIC0.94□□□□□ -2.26
SSR1P43307 Y_RNA.561-201ENST00000384694 100 ntBASIC0.94□□□□□ -2.26
SSR1P43307 MIR660-201ENST00000385235 97 ntBASIC0.94□□□□□ -2.26
SSR1P43307 U8.16-201ENST00000391279 133 ntBASIC0.94□□□□□ -2.26
SSR1P43307 AL034345.1-201ENST00000407768 123 ntBASIC0.94□□□□□ -2.26
SSR1P43307 RNU2-64P-201ENST00000411315 191 ntBASIC0.94□□□□□ -2.26
SSR1P43307 AC006461.1-201ENST00000412637 326 ntBASIC0.94□□□□□ -2.26
SSR1P43307 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.94□□□□□ -2.26
SSR1P43307 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.94□□□□□ -2.26
SSR1P43307 HMGN1P7-201ENST00000491722 313 ntBASIC0.94□□□□□ -2.26
SSR1P43307 AC105758.1-201ENST00000506038 399 ntBASIC0.94□□□□□ -2.26
SSR1P43307 RNA5SP168-201ENST00000516642 112 ntBASIC0.94□□□□□ -2.26
SSR1P43307 AC013244.2-201ENST00000603396 103 ntBASIC0.94□□□□□ -2.26
SSR1P43307 AC124303.1-201ENST00000605703 360 ntBASIC0.94□□□□□ -2.26
SSR1P43307 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.94□□□□□ -2.26
SSR1P43307 AC073349.3-201ENST00000617616 186 ntBASIC0.94□□□□□ -2.26
SSR1P43307 AL133216.2-202ENST00000634512 349 ntBASIC0.94□□□□□ -2.26
SSR1P43307 RNU6-1266P-201ENST00000362794 105 ntBASIC0.93□□□□□ -2.26
SSR1P43307 Y_RNA.267-201ENST00000364679 109 ntBASIC0.93□□□□□ -2.26
SSR1P43307 RNU6-1148P-201ENST00000410992 104 ntBASIC0.93□□□□□ -2.26
SSR1P43307 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.93□□□□□ -2.26
SSR1P43307 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.93□□□□□ -2.26
SSR1P43307 MRPS10P1-201ENST00000448483 130 ntBASIC0.93□□□□□ -2.26
SSR1P43307 AC018710.1-201ENST00000506509 158 ntBASIC0.93□□□□□ -2.26
SSR1P43307 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
SSR1P43307 TRMT112P2-201ENST00000512910 132 ntBASIC0.93□□□□□ -2.26
SSR1P43307 RNU6-314P-201ENST00000516574 104 ntBASIC0.93□□□□□ -2.26
SSR1P43307 MTND2P38-201ENST00000522536 667 ntBASIC0.93□□□□□ -2.26
SSR1P43307 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.93□□□□□ -2.26
SSR1P43307 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.93□□□□□ -2.26
SSR1P43307 AC008163.1-202ENST00000636004 2889 ntBASIC0.92□□□□□ -2.26
SSR1P43307 RNU4-79P-201ENST00000362764 141 ntBASIC0.92□□□□□ -2.26
SSR1P43307 Y_RNA.124-201ENST00000363339 93 ntBASIC0.92□□□□□ -2.26
SSR1P43307 Y_RNA.135-201ENST00000363439 95 ntBASIC0.92□□□□□ -2.26
SSR1P43307 RNY3P3-201ENST00000363816 102 ntBASIC0.92□□□□□ -2.26
SSR1P43307 Y_RNA.184-201ENST00000363884 108 ntBASIC0.92□□□□□ -2.26
SSR1P43307 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SSR1P43307 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.92□□□□□ -2.26
SSR1P43307 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms