Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 BTBD7P2-201ENST00000441962 620 ntBASIC-0.74□□□□□ -2.53
HTTP42858 RNU7-102P-201ENST00000458948 62 ntBASIC-0.74□□□□□ -2.53
HTTP42858 RNU6-274P-201ENST00000459566 107 ntBASIC-0.74□□□□□ -2.53
HTTP42858 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.74□□□□□ -2.53
HTTP42858 RNU7-43P-201ENST00000516554 64 ntBASIC-0.74□□□□□ -2.53
HTTP42858 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.74□□□□□ -2.53
HTTP42858 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.74□□□□□ -2.53
HTTP42858 RNU6-619P-201ENST00000365146 108 ntBASIC-0.74□□□□□ -2.53
HTTP42858 MTCO1P17-201ENST00000411522 491 ntBASIC-0.74□□□□□ -2.53
HTTP42858 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.74□□□□□ -2.53
HTTP42858 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.74□□□□□ -2.53
HTTP42858 RNU6-983P-201ENST00000516004 103 ntBASIC-0.74□□□□□ -2.53
HTTP42858 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
HTTP42858 MIR4752-201ENST00000579672 72 ntBASIC-0.74□□□□□ -2.53
HTTP42858 Z99289.3-201ENST00000605586 594 ntBASIC-0.74□□□□□ -2.53
HTTP42858 AC108747.1-201ENST00000609508 535 ntBASIC-0.74□□□□□ -2.53
HTTP42858 uc_338.19-201ENST00000616808 99 ntBASIC-0.74□□□□□ -2.53
HTTP42858 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.75□□□□□ -2.53
HTTP42858 RNA5SP48-201ENST00000363969 126 ntBASIC-0.75□□□□□ -2.53
HTTP42858 MT-TN-201ENST00000387400 73 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AC098592.1-201ENST00000419352 333 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AC022137.1-201ENST00000483735 151 ntBASIC-0.75□□□□□ -2.53
HTTP42858 RPL23AP75-201ENST00000491601 451 ntBASIC-0.75□□□□□ -2.53
HTTP42858 RNU6-135P-201ENST00000516769 101 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.75□□□□□ -2.53
HTTP42858 AC090617.3-201ENST00000573670 475 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AC091135.1-201ENST00000585943 307 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AL353803.5-201ENST00000599815 141 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AC010975.3-201ENST00000618727 978 ntBASIC-0.75□□□□□ -2.53
HTTP42858 RNU6-545P-201ENST00000362681 104 ntBASIC-0.75□□□□□ -2.53
HTTP42858 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.75□□□□□ -2.53
HTTP42858 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.75□□□□□ -2.53
HTTP42858 RNY3P14-201ENST00000384309 102 ntBASIC-0.75□□□□□ -2.53
HTTP42858 RNU6-535P-201ENST00000384722 107 ntBASIC-0.75□□□□□ -2.53
HTTP42858 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.75□□□□□ -2.53
HTTP42858 MIR18B-201ENST00000454574 71 ntBASIC-0.75□□□□□ -2.53
HTTP42858 RNU7-62P-201ENST00000458856 62 ntBASIC-0.75□□□□□ -2.53
HTTP42858 RNU6-143P-201ENST00000516942 93 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.75□□□□□ -2.53
HTTP42858 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.75□□□□□ -2.53
HTTP42858 MIR544A-201ENST00000384855 91 ntBASIC-0.75□□□□□ -2.53
HTTP42858 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
HTTP42858 RNU6-613P-201ENST00000410412 108 ntBASIC-0.75□□□□□ -2.53
HTTP42858 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AL500527.2-201ENST00000454105 95 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.75□□□□□ -2.53
HTTP42858 RNU7-41P-201ENST00000515917 61 ntBASIC-0.75□□□□□ -2.53
HTTP42858 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AC024405.2-202ENST00000532731 184 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AL157687.1-201ENST00000554853 619 ntBASIC-0.75□□□□□ -2.53
HTTP42858 MTND4P33-201ENST00000556706 766 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AC095057.3-201ENST00000567102 1157 ntBASIC-0.75□□□□□ -2.53
HTTP42858 MIR4280-201ENST00000582178 76 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AC234772.3-201ENST00000602277 528 ntBASIC-0.75□□□□□ -2.53
HTTP42858 MIR6507-201ENST00000613630 70 ntBASIC-0.75□□□□□ -2.53
HTTP42858 AC005609.4-201ENST00000625071 447 ntBASIC-0.75□□□□□ -2.53
HTTP42858 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.76□□□□□ -2.53
HTTP42858 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.76□□□□□ -2.53
HTTP42858 RNU6-934P-201ENST00000365154 107 ntBASIC-0.76□□□□□ -2.53
HTTP42858 RNU6-417P-201ENST00000384712 107 ntBASIC-0.76□□□□□ -2.53
HTTP42858 SNORD110-201ENST00000408189 75 ntBASIC-0.76□□□□□ -2.53
HTTP42858 RNA5SP390-201ENST00000410191 113 ntBASIC-0.76□□□□□ -2.53
HTTP42858 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AL139421.1-201ENST00000423010 169 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AC005345.1-201ENST00000431868 217 ntBASIC-0.76□□□□□ -2.53
HTTP42858 FABP5P15-201ENST00000453566 214 ntBASIC-0.76□□□□□ -2.53
HTTP42858 RNU7-73P-201ENST00000458743 63 ntBASIC-0.76□□□□□ -2.53
HTTP42858 RNU7-59P-201ENST00000459101 61 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.76□□□□□ -2.53
HTTP42858 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.76□□□□□ -2.53
HTTP42858 SNORA31.19-201ENST00000517079 126 ntBASIC-0.76□□□□□ -2.53
HTTP42858 VN1R88P-201ENST00000596787 292 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AL158042.1-201ENST00000605338 460 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AP001033.2-201ENST00000609701 1003 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AC092104.1-201ENST00000497346 1441 ntBASIC-0.76□□□□□ -2.53
HTTP42858 RNU6-543P-201ENST00000362576 108 ntBASIC-0.76□□□□□ -2.53
HTTP42858 RNU6-378P-201ENST00000384324 107 ntBASIC-0.76□□□□□ -2.53
HTTP42858 SNORD41-201ENST00000386967 70 ntBASIC-0.76□□□□□ -2.53
HTTP42858 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AL031779.1-201ENST00000415663 330 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AL365338.1-201ENST00000422282 858 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AC023538.1-201ENST00000534576 736 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AC140658.3-201ENST00000567603 271 ntBASIC-0.76□□□□□ -2.53
HTTP42858 U7.6-201ENST00000610841 64 ntBASIC-0.76□□□□□ -2.53
HTTP42858 AC093726.3-201ENST00000637588 150 ntBASIC-0.76□□□□□ -2.53
HTTP42858 SNORD45.3-201ENST00000363836 72 ntBASIC-0.77□□□□□ -2.53
HTTP42858 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.77□□□□□ -2.53
HTTP42858 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.77□□□□□ -2.53
HTTP42858 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.77□□□□□ -2.53
HTTP42858 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.77□□□□□ -2.53
HTTP42858 AC007283.2-201ENST00000424739 197 ntBASIC-0.77□□□□□ -2.53
HTTP42858 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.77□□□□□ -2.53
HTTP42858 RPL39P25-201ENST00000449384 154 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.77□□□□□ -2.53
HTTP42858 SNORA13-201ENST00000458790 133 ntBASIC-0.77□□□□□ -2.53
HTTP42858 SCARNA18B-201ENST00000458806 135 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AC097462.1-201ENST00000514125 324 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AC046134.1-201ENST00000514454 666 ntBASIC-0.77□□□□□ -2.53
HTTP42858 SNORD38.3-201ENST00000516599 73 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms