Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 HMGN2P3-201ENST00000433603 273 ntBASIC1.92□□□□□ -2.1
APOBEC1P41238 HMGN2P5-201ENST00000436882 273 ntBASIC1.92□□□□□ -2.1
APOBEC1P41238 RNU2-19P-201ENST00000517288 84 ntBASIC1.92□□□□□ -2.1
APOBEC1P41238 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.92□□□□□ -2.1
APOBEC1P41238 MIR4513-201ENST00000581077 86 ntBASIC1.92□□□□□ -2.1
APOBEC1P41238 AC007229.1-201ENST00000590455 412 ntBASIC1.92□□□□□ -2.1
APOBEC1P41238 AC245060.5-201ENST00000610778 3293 ntBASIC1.92□□□□□ -2.1
APOBEC1P41238 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
APOBEC1P41238 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
APOBEC1P41238 Y_RNA.462-201ENST00000384268 102 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 RNU6-1160P-201ENST00000384546 104 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 RNU5A-5P-201ENST00000411054 116 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 AL390729.2-201ENST00000416137 156 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 AC055731.1-201ENST00000474387 401 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 RNU6-1041P-201ENST00000516254 102 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 RNU6-1137P-201ENST00000517073 99 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 AC113195.1-201ENST00000579952 141 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.91□□□□□ -2.1
APOBEC1P41238 AL355297.3-201ENST00000604082 446 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.15-201ENST00000611544 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.16-201ENST00000613119 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.12-201ENST00000613778 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.20-201ENST00000613956 192 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.9-201ENST00000615427 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.11-201ENST00000616345 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.2-201ENST00000616535 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.3-201ENST00000617785 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 AC007742.2-201ENST00000618226 398 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.19-201ENST00000618602 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 RNU2-1-201ENST00000618664 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.6-201ENST00000619225 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 AP000553.5-201ENST00000641933 54 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 ZNF658B-202ENST00000615961 3375 ntBASIC1.91□□□□□ -2.1
APOBEC1P41238 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
APOBEC1P41238 MIR606-201ENST00000384851 96 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
APOBEC1P41238 SNORA3.2-201ENST00000408221 125 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 RN7SKP192-201ENST00000411291 327 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.9□□□□□ -2.11
APOBEC1P41238 AC005002.2-201ENST00000438228 269 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 MTND2P29-201ENST00000438595 412 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
APOBEC1P41238 AP002001.1-203ENST00000534002 267 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.9□□□□□ -2.11
APOBEC1P41238 MIR5694-201ENST00000581190 76 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 MIR5002-201ENST00000584713 97 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 AC022432.1-201ENST00000595739 310 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 AC006380.1-201ENST00000603598 186 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 AL353149.1-201ENST00000610667 244 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 AL021879.1-201ENST00000611756 288 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 U1.36-201ENST00000620684 176 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 AC091932.3-201ENST00000624223 323 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 MIR219B-201ENST00000637023 88 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
APOBEC1P41238 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.9□□□□□ -2.11
APOBEC1P41238 AC131280.1-202ENST00000624067 4211 ntBASIC1.9□□□□□ -2.11
APOBEC1P41238 snoU2-30.2-201ENST00000362805 70 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 Y_RNA.143-201ENST00000363520 106 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 Y_RNA.183-201ENST00000363882 113 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 RNU6-454P-201ENST00000364292 107 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 SNORA16B-201ENST00000364674 135 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
APOBEC1P41238 AL355497.1-201ENST00000406262 551 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 RN7SKP223-201ENST00000410582 62 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 AC016909.1-201ENST00000415916 166 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 HMGN2P34-201ENST00000437647 269 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 AC073910.1-201ENST00000445047 438 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 SUMO1P2-201ENST00000452524 304 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.89□□□□□ -2.11
APOBEC1P41238 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.89□□□□□ -2.11
APOBEC1P41238 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
APOBEC1P41238 AC010598.1-201ENST00000510378 103 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 RNU6-397P-201ENST00000516226 104 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 RNU1-40P-201ENST00000516816 164 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 RNU1-97P-201ENST00000516872 164 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.89□□□□□ -2.11
APOBEC1P41238 AC008749.1-201ENST00000597650 306 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 RAC1P9-201ENST00000604990 392 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.89□□□□□ -2.11
APOBEC1P41238 PART1_1.1-201ENST00000611761 217 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 MIR6840-201ENST00000611937 71 ntBASIC1.89□□□□□ -2.11
APOBEC1P41238 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
APOBEC1P41238 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
APOBEC1P41238 AL596028.1-201ENST00000326971 197 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 RNU6-1175P-201ENST00000365200 107 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 SNORA6-201ENST00000384033 151 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 SNORD63-201ENST00000384262 68 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 SNORA11.2-201ENST00000408318 127 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 RNU6-130P-201ENST00000411112 103 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.88□□□□□ -2.11
APOBEC1P41238 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.88□□□□□ -2.11
APOBEC1P41238 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.88□□□□□ -2.11
APOBEC1P41238 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 285.7 ms