Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.56□□□□□ -2
COL15A1P39059 AC018630.3-201ENST00000542637 96 ntBASIC2.56□□□□□ -2
COL15A1P39059 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.56□□□□□ -2
COL15A1P39059 AC010205.1-201ENST00000616668 449 ntBASIC2.56□□□□□ -2
COL15A1P39059 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
COL15A1P39059 Y_RNA.47-201ENST00000362697 108 ntBASIC2.55□□□□□ -2
COL15A1P39059 Y_RNA.143-201ENST00000363520 106 ntBASIC2.55□□□□□ -2
COL15A1P39059 Y_RNA.183-201ENST00000363882 113 ntBASIC2.55□□□□□ -2
COL15A1P39059 RNU6-611P-201ENST00000384276 104 ntBASIC2.55□□□□□ -2
COL15A1P39059 Y_RNA.574-201ENST00000384766 95 ntBASIC2.55□□□□□ -2
COL15A1P39059 MIR95-201ENST00000385072 81 ntBASIC2.55□□□□□ -2
COL15A1P39059 SNORA17.3-201ENST00000391159 129 ntBASIC2.55□□□□□ -2
COL15A1P39059 RNU6-1109P-201ENST00000391187 107 ntBASIC2.55□□□□□ -2
COL15A1P39059 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.55□□□□□ -2
COL15A1P39059 RNU6-321P-201ENST00000410912 106 ntBASIC2.55□□□□□ -2
COL15A1P39059 AC004866.1-201ENST00000411748 78 ntBASIC2.55□□□□□ -2
COL15A1P39059 IPO7P1-201ENST00000442031 636 ntBASIC2.55□□□□□ -2
COL15A1P39059 DYNLT3P2-201ENST00000442517 295 ntBASIC2.55□□□□□ -2
COL15A1P39059 AL139109.1-201ENST00000455491 297 ntBASIC2.55□□□□□ -2
COL15A1P39059 AC074133.1-201ENST00000515696 183 ntBASIC2.55□□□□□ -2
COL15A1P39059 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
COL15A1P39059 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.55□□□□□ -2
COL15A1P39059 AC022616.8-201ENST00000533569 253 ntBASIC2.55□□□□□ -2
COL15A1P39059 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
COL15A1P39059 AC130454.1-201ENST00000622948 401 ntBASIC2.55□□□□□ -2
COL15A1P39059 AC005336.3-201ENST00000623833 2679 ntBASIC2.55□□□□□ -2
COL15A1P39059 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
COL15A1P39059 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL15A1P39059 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL15A1P39059 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.54□□□□□ -2
COL15A1P39059 Y_RNA.19-201ENST00000362462 99 ntBASIC2.54□□□□□ -2
COL15A1P39059 RNU1-23P-201ENST00000363361 144 ntBASIC2.54□□□□□ -2
COL15A1P39059 RNU6-770P-201ENST00000363929 105 ntBASIC2.54□□□□□ -2
COL15A1P39059 Y_RNA.276-201ENST00000364732 109 ntBASIC2.54□□□□□ -2
COL15A1P39059 Y_RNA.415-201ENST00000384012 112 ntBASIC2.54□□□□□ -2
COL15A1P39059 RNU6-196P-201ENST00000384315 107 ntBASIC2.54□□□□□ -2
COL15A1P39059 RNU6-130P-201ENST00000411112 103 ntBASIC2.54□□□□□ -2
COL15A1P39059 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.54□□□□□ -2
COL15A1P39059 ELOCP20-201ENST00000422460 345 ntBASIC2.54□□□□□ -2
COL15A1P39059 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.54□□□□□ -2
COL15A1P39059 RNU6-625P-201ENST00000459412 107 ntBASIC2.54□□□□□ -2
COL15A1P39059 MTCO2P24-201ENST00000515611 426 ntBASIC2.54□□□□□ -2
COL15A1P39059 AL049779.4-201ENST00000604500 156 ntBASIC2.54□□□□□ -2
COL15A1P39059 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.54□□□□□ -2
COL15A1P39059 AL357075.2-201ENST00000614906 189 ntBASIC2.54□□□□□ -2
COL15A1P39059 AC068205.3-201ENST00000636385 468 ntBASIC2.54□□□□□ -2
COL15A1P39059 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.53□□□□□ -2
COL15A1P39059 MIR337-201ENST00000362281 93 ntBASIC2.53□□□□□ -2
COL15A1P39059 Y_RNA.144-201ENST00000363521 113 ntBASIC2.53□□□□□ -2
COL15A1P39059 Y_RNA.214-201ENST00000364201 112 ntBASIC2.53□□□□□ -2
COL15A1P39059 RNU6-1305P-201ENST00000364353 104 ntBASIC2.53□□□□□ -2
COL15A1P39059 SNORA25.9-201ENST00000365087 128 ntBASIC2.53□□□□□ -2
COL15A1P39059 RNU6-438P-201ENST00000365561 103 ntBASIC2.53□□□□□ -2
COL15A1P39059 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.53□□□□□ -2
COL15A1P39059 RPL21P1-201ENST00000399532 476 ntBASIC2.53□□□□□ -2
COL15A1P39059 AC019129.1-201ENST00000403786 261 ntBASIC2.53□□□□□ -2
COL15A1P39059 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.53□□□□□ -2
COL15A1P39059 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.53□□□□□ -2
COL15A1P39059 AC018448.1-201ENST00000552843 316 ntBASIC2.53□□□□□ -2
COL15A1P39059 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.53□□□□□ -2
COL15A1P39059 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2.01
COL15A1P39059 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL15A1P39059 SNORD87-201ENST00000364849 89 ntBASIC2.52□□□□□ -2.01
COL15A1P39059 SNORA72.2-201ENST00000365028 127 ntBASIC2.52□□□□□ -2.01
COL15A1P39059 MTCYBP9-201ENST00000431021 303 ntBASIC2.52□□□□□ -2.01
COL15A1P39059 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.52□□□□□ -2.01
COL15A1P39059 AC003989.2-201ENST00000440224 169 ntBASIC2.52□□□□□ -2.01
COL15A1P39059 AL731563.1-201ENST00000442202 214 ntBASIC2.52□□□□□ -2.01
COL15A1P39059 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.52□□□□□ -2.01
COL15A1P39059 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.52□□□□□ -2.01
COL15A1P39059 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.52□□□□□ -2.01
COL15A1P39059 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.52□□□□□ -2.01
COL15A1P39059 MIR4753-201ENST00000585119 83 ntBASIC2.52□□□□□ -2.01
COL15A1P39059 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.52□□□□□ -2.01
COL15A1P39059 MIR376A1-201ENST00000616574 68 ntBASIC2.52□□□□□ -2.01
COL15A1P39059 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
COL15A1P39059 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.51□□□□□ -2.01
COL15A1P39059 RNU6-545P-201ENST00000362681 104 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 RNU6-626P-201ENST00000363354 107 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 RNA5SP393-201ENST00000363423 117 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 MIR524-201ENST00000385242 87 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 MIR300-201ENST00000401138 83 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 AL357139.1-201ENST00000407792 426 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 RNU2-20P-201ENST00000410425 191 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 RNA5SP338-201ENST00000410495 85 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.51□□□□□ -2.01
COL15A1P39059 AC108667.1-201ENST00000428618 249 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.51□□□□□ -2.01
COL15A1P39059 RNA5SP182-201ENST00000516064 82 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 RNA5SP480-201ENST00000516840 109 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.51□□□□□ -2.01
COL15A1P39059 AC233702.2-202ENST00000562547 291 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 MIR1248-201ENST00000629190 106 ntBASIC2.51□□□□□ -2.01
COL15A1P39059 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL15A1P39059 MIRLET7G-201ENST00000362280 84 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 Y_RNA.64-201ENST00000362845 102 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 RNU6-961P-201ENST00000363893 105 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 RNU6-20P-201ENST00000384106 107 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 RNU6-937P-201ENST00000384325 106 ntBASIC2.5□□□□□ -2.01
COL15A1P39059 Y_RNA.512-201ENST00000384518 102 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms