Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC098869.1-201ENST00000481627 292 ntBASIC0.45□□□□□ -2.34
RPA3P35244 MTCO1P29-201ENST00000496868 288 ntBASIC0.45□□□□□ -2.34
RPA3P35244 AC113410.1-201ENST00000505029 247 ntBASIC0.45□□□□□ -2.34
RPA3P35244 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.45□□□□□ -2.34
RPA3P35244 AL512605.2-201ENST00000592972 256 ntBASIC0.45□□□□□ -2.34
RPA3P35244 AL117336.2-201ENST00000602435 335 ntBASIC0.45□□□□□ -2.34
RPA3P35244 AC009229.3-201ENST00000608056 282 ntBASIC0.45□□□□□ -2.34
RPA3P35244 AL391903.3-201ENST00000612158 163 ntBASIC0.45□□□□□ -2.34
RPA3P35244 AC022709.1-201ENST00000615967 87 ntBASIC0.45□□□□□ -2.34
RPA3P35244 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
RPA3P35244 MTND4P12-201ENST00000498999 1377 ntBASIC0.45□□□□□ -2.34
RPA3P35244 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
RPA3P35244 RNU6-82P-201ENST00000363970 107 ntBASIC0.44□□□□□ -2.34
RPA3P35244 Y_RNA.378-201ENST00000365652 113 ntBASIC0.44□□□□□ -2.34
RPA3P35244 MIR32-201ENST00000384965 70 ntBASIC0.44□□□□□ -2.34
RPA3P35244 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
RPA3P35244 AL590002.1-201ENST00000406554 418 ntBASIC0.44□□□□□ -2.34
RPA3P35244 SNORD99-201ENST00000408612 74 ntBASIC0.44□□□□□ -2.34
RPA3P35244 Z82188.1-201ENST00000436709 154 ntBASIC0.44□□□□□ -2.34
RPA3P35244 MTCO2P16-201ENST00000436962 677 ntBASIC0.44□□□□□ -2.34
RPA3P35244 MTCO2P7-201ENST00000446518 666 ntBASIC0.44□□□□□ -2.34
RPA3P35244 AC010469.2-201ENST00000496412 480 ntBASIC0.44□□□□□ -2.34
RPA3P35244 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.44□□□□□ -2.34
RPA3P35244 SNORD111.1-201ENST00000516421 86 ntBASIC0.44□□□□□ -2.34
RPA3P35244 RNA5SP121-201ENST00000516537 101 ntBASIC0.44□□□□□ -2.34
RPA3P35244 RNU6-405P-201ENST00000516637 110 ntBASIC0.44□□□□□ -2.34
RPA3P35244 MTCO2P4-201ENST00000517968 247 ntBASIC0.44□□□□□ -2.34
RPA3P35244 AP001372.4-201ENST00000524889 472 ntBASIC0.44□□□□□ -2.34
RPA3P35244 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.44□□□□□ -2.34
RPA3P35244 AC040904.1-201ENST00000590850 223 ntBASIC0.44□□□□□ -2.34
RPA3P35244 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.44□□□□□ -2.34
RPA3P35244 RNU6-873P-201ENST00000363833 107 ntBASIC0.43□□□□□ -2.34
RPA3P35244 SNORD115-8-201ENST00000363856 82 ntBASIC0.43□□□□□ -2.34
RPA3P35244 SNORD115-38-201ENST00000365037 82 ntBASIC0.43□□□□□ -2.34
RPA3P35244 Y_RNA.330-201ENST00000365230 109 ntBASIC0.43□□□□□ -2.34
RPA3P35244 RNU6-933P-201ENST00000384424 107 ntBASIC0.43□□□□□ -2.34
RPA3P35244 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.43□□□□□ -2.34
RPA3P35244 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.43□□□□□ -2.34
RPA3P35244 SNORA19.2-201ENST00000516013 114 ntBASIC0.43□□□□□ -2.34
RPA3P35244 SNORA70.12-201ENST00000516084 153 ntBASIC0.43□□□□□ -2.34
RPA3P35244 RNU2-56P-201ENST00000516826 190 ntBASIC0.43□□□□□ -2.34
RPA3P35244 MIR3192-201ENST00000584920 77 ntBASIC0.43□□□□□ -2.34
RPA3P35244 AC017083.3-201ENST00000609955 700 ntBASIC0.43□□□□□ -2.34
RPA3P35244 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
RPA3P35244 SNORD50.1-201ENST00000362987 71 ntBASIC0.42□□□□□ -2.34
RPA3P35244 Y_RNA.269-201ENST00000364685 89 ntBASIC0.42□□□□□ -2.34
RPA3P35244 Y_RNA.354-201ENST00000365448 111 ntBASIC0.42□□□□□ -2.34
RPA3P35244 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
RPA3P35244 RNU6-214P-201ENST00000384130 107 ntBASIC0.42□□□□□ -2.34
RPA3P35244 RNU5A-6P-201ENST00000384136 116 ntBASIC0.42□□□□□ -2.34
RPA3P35244 SNORD37.1-201ENST00000390968 65 ntBASIC0.42□□□□□ -2.34
RPA3P35244 SNORD89-201ENST00000390981 114 ntBASIC0.42□□□□□ -2.34
RPA3P35244 AL353193.1-201ENST00000421444 268 ntBASIC0.42□□□□□ -2.34
RPA3P35244 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.42□□□□□ -2.34
RPA3P35244 AC091179.3-201ENST00000474761 144 ntBASIC0.42□□□□□ -2.34
RPA3P35244 RNU6-1332P-201ENST00000516666 104 ntBASIC0.42□□□□□ -2.34
RPA3P35244 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.42□□□□□ -2.34
RPA3P35244 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.42□□□□□ -2.34
RPA3P35244 AC023827.1-201ENST00000569247 97 ntBASIC0.42□□□□□ -2.34
RPA3P35244 Z94722.1-201ENST00000604328 474 ntBASIC0.42□□□□□ -2.34
RPA3P35244 Y_RNA.267-201ENST00000364679 109 ntBASIC0.41□□□□□ -2.34
RPA3P35244 Y_RNA.319-201ENST00000365138 92 ntBASIC0.41□□□□□ -2.34
RPA3P35244 RNU5A-2P-201ENST00000384337 116 ntBASIC0.41□□□□□ -2.34
RPA3P35244 MIR526A1-201ENST00000384897 85 ntBASIC0.41□□□□□ -2.34
RPA3P35244 MTCO2P19-201ENST00000427513 598 ntBASIC0.41□□□□□ -2.34
RPA3P35244 AL606489.2-201ENST00000433886 234 ntBASIC0.41□□□□□ -2.34
RPA3P35244 AL445567.1-201ENST00000439121 144 ntBASIC0.41□□□□□ -2.34
RPA3P35244 MTND4P18-201ENST00000447010 465 ntBASIC0.41□□□□□ -2.34
RPA3P35244 AC079354.2-201ENST00000453523 154 ntBASIC0.41□□□□□ -2.34
RPA3P35244 AC233266.1-201ENST00000454518 96 ntBASIC0.41□□□□□ -2.34
RPA3P35244 AC091021.1-201ENST00000468051 388 ntBASIC0.41□□□□□ -2.34
RPA3P35244 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.41□□□□□ -2.34
RPA3P35244 AC022868.1-201ENST00000517767 391 ntBASIC0.41□□□□□ -2.34
RPA3P35244 AC131055.1-201ENST00000584626 316 ntBASIC0.41□□□□□ -2.34
RPA3P35244 AC109347.2-201ENST00000610220 349 ntBASIC0.41□□□□□ -2.34
RPA3P35244 AC242852.1-201ENST00000612151 96 ntBASIC0.41□□□□□ -2.34
RPA3P35244 MIR6515-201ENST00000619843 57 ntBASIC0.41□□□□□ -2.34
RPA3P35244 AC091931.1-201ENST00000623488 728 ntBASIC0.41□□□□□ -2.34
RPA3P35244 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
RPA3P35244 ELL2P3-201ENST00000457883 1602 ntBASIC0.4□□□□□ -2.35
RPA3P35244 MIRLET7C-201ENST00000362160 84 ntBASIC0.4□□□□□ -2.35
RPA3P35244 SNORA1B-201ENST00000362535 133 ntBASIC0.4□□□□□ -2.35
RPA3P35244 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
RPA3P35244 RNU4-66P-201ENST00000365199 138 ntBASIC0.4□□□□□ -2.35
RPA3P35244 RNU6-38P-201ENST00000384085 107 ntBASIC0.4□□□□□ -2.35
RPA3P35244 AC073464.1-201ENST00000429823 534 ntBASIC0.4□□□□□ -2.35
RPA3P35244 AL162725.1-201ENST00000435405 301 ntBASIC0.4□□□□□ -2.35
RPA3P35244 snoU13.18-201ENST00000459483 104 ntBASIC0.4□□□□□ -2.35
RPA3P35244 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.4□□□□□ -2.35
RPA3P35244 AC107401.1-201ENST00000503426 685 ntBASIC0.4□□□□□ -2.35
RPA3P35244 AC097462.1-201ENST00000514125 324 ntBASIC0.4□□□□□ -2.35
RPA3P35244 RNA5SP401-201ENST00000515920 127 ntBASIC0.4□□□□□ -2.35
RPA3P35244 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
RPA3P35244 RNA5SP436-201ENST00000516020 115 ntBASIC0.4□□□□□ -2.35
RPA3P35244 RNU7-28P-201ENST00000516759 62 ntBASIC0.4□□□□□ -2.35
RPA3P35244 RNU7-172P-201ENST00000517125 64 ntBASIC0.4□□□□□ -2.35
RPA3P35244 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
RPA3P35244 AC027288.2-201ENST00000553028 243 ntBASIC0.4□□□□□ -2.35
RPA3P35244 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.4□□□□□ -2.35
RPA3P35244 AL133215.3-201ENST00000609801 448 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms