Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MIR548F4-201ENST00000408515 105 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 RNU6-130P-201ENST00000411112 103 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.09□□□□□ -2.07
HOXA13P31271 USP9YP16-201ENST00000430287 407 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 AC007395.1-201ENST00000451333 677 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 USP9YP23-201ENST00000455085 407 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 AC010655.3-201ENST00000478818 450 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 RNU6-1045P-201ENST00000516321 107 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 Y_RNA.720-201ENST00000517166 92 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 AC022868.1-201ENST00000517767 391 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 AC040926.1-201ENST00000530195 238 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 AC090617.3-201ENST00000573670 475 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.09□□□□□ -2.07
HOXA13P31271 AL357075.2-201ENST00000614906 189 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 AC011476.5-201ENST00000615594 130 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 AC084768.2-201ENST00000622736 221 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
HOXA13P31271 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HOXA13P31271 RNU6-1301P-201ENST00000362724 104 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 SNORD114-6-201ENST00000364393 72 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 Y_RNA.389-201ENST00000383924 113 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 Y_RNA.455-201ENST00000384230 98 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 Y_RNA.459-201ENST00000384251 102 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXA13P31271 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.08□□□□□ -2.08
HOXA13P31271 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HOXA13P31271 EIF1P2-201ENST00000428233 350 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 AC074290.1-201ENST00000448883 135 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 AC114982.1-201ENST00000469402 321 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 RNU6-397P-201ENST00000516226 104 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 GNAI2P1-201ENST00000541815 315 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 VN1R91P-201ENST00000594377 169 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 RAC1P9-201ENST00000604990 392 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 AL021879.1-201ENST00000611756 288 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 AC005296.1-201ENST00000616145 209 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 U6.92-201ENST00000636464 89 ntBASIC2.08□□□□□ -2.08
HOXA13P31271 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
HOXA13P31271 RNU6-1309P-201ENST00000363305 108 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 Y_RNA.145-201ENST00000363527 102 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNU5F-3P-201ENST00000363767 117 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 SNORD115-8-201ENST00000363856 82 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNA5SP493-201ENST00000364115 91 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 SNORD115-38-201ENST00000365037 82 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNU6-806P-201ENST00000365147 105 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNU6-245P-201ENST00000384020 107 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNU6-574P-201ENST00000384265 107 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 SNORA51.11-201ENST00000384442 131 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNU6-1105P-201ENST00000384774 107 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 MIR628-201ENST00000385229 95 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNU6-159P-201ENST00000391080 106 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNA5SP465-201ENST00000391195 109 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNU1-139P-201ENST00000391307 165 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 U3.40-201ENST00000408706 208 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNA5SP450-201ENST00000411206 102 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 AC114482.1-201ENST00000418010 247 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXA13P31271 AC016925.1-201ENST00000458303 298 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNA5SP57-201ENST00000459463 123 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNU6-1114P-201ENST00000516022 107 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 RNU6-475P-201ENST00000516073 104 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 SNORA40.14-201ENST00000516543 86 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 AC124312.5-201ENST00000604451 268 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 AL353997.5-201ENST00000618886 171 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 ZNF702P-202ENST00000434269 1966 ntBASIC2.07□□□□□ -2.08
HOXA13P31271 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
HOXA13P31271 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
HOXA13P31271 RNU1-17P-201ENST00000363022 152 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 Y_RNA.105-201ENST00000363182 111 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 RNU6-926P-201ENST00000384075 107 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 MIR17-201ENST00000385012 84 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 MIR568-201ENST00000385036 95 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 AL358176.2-201ENST00000425769 204 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 AC016717.1-201ENST00000448918 286 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 MTND5P22-201ENST00000458380 195 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 Y_RNA.715-201ENST00000517082 110 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 AC144568.1-201ENST00000520139 137 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 AC093023.1-201ENST00000547375 507 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 AL442163.3-201ENST00000554110 156 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXA13P31271 AL162730.1-201ENST00000605734 292 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 SNORD11B-201ENST00000607707 90 ntBASIC2.06□□□□□ -2.08
HOXA13P31271 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXA13P31271 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA13P31271 Y_RNA.133-201ENST00000363428 110 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 RNU6-137P-201ENST00000363680 108 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 Y_RNA.179-201ENST00000363844 90 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 RNU6-879P-201ENST00000364328 108 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 SNORD14.1-201ENST00000365609 90 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 Y_RNA.422-201ENST00000384054 114 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 RNU6-281P-201ENST00000384212 103 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 MIR1283-2-201ENST00000408621 87 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA13P31271 RPEP5-201ENST00000441137 268 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA13P31271 AC010531.2-201ENST00000465012 153 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms