Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNU6-137P-201ENST00000363680 108 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 RNU6-1080P-201ENST00000383982 107 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 RNU6-245P-201ENST00000384020 107 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 RNU6-296P-201ENST00000384608 107 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 RNU6-331P-201ENST00000384724 107 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 MIR10B-201ENST00000385011 110 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 NCOR1P3-201ENST00000420479 303 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXA9P31269 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXA9P31269 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXA9P31269 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXA9P31269 MTND3P10-201ENST00000450967 341 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.25□□□□□ -2.21
HOXA9P31269 AC005908.1-201ENST00000468701 347 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 AP000870.1-201ENST00000472927 406 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 RPL7P42-201ENST00000481005 679 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 AC103851.1-201ENST00000506833 274 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 AC025465.3-201ENST00000510570 311 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 RNU7-175P-201ENST00000515915 61 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 RNU6-948P-201ENST00000516374 107 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 AL590705.4-201ENST00000532209 134 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 AC022306.2-201ENST00000617563 647 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 AC126177.8-201ENST00000618339 1015 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 AC068205.3-201ENST00000636385 468 ntBASIC1.25□□□□□ -2.21
HOXA9P31269 RNU6-874P-201ENST00000362390 105 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 SNORD87-201ENST00000364849 89 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 SNORD81.2-201ENST00000365153 76 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 Y_RNA.482-201ENST00000384377 111 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 RNU6-601P-201ENST00000384540 107 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 RNU6-1235P-201ENST00000384559 107 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 MIR548B-201ENST00000385247 97 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 RPL37P10-201ENST00000412884 288 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 AC138393.2-201ENST00000414742 246 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 RPL21P111-201ENST00000418453 477 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 MTND3P23-201ENST00000431980 347 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 AC245047.4-201ENST00000433189 144 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 AC107399.1-201ENST00000451226 265 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 ATP5J2P3-201ENST00000451550 258 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 RNU6-498P-201ENST00000459468 107 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 RNU7-57P-201ENST00000459540 60 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 RPL31P58-201ENST00000469001 379 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 MTND4P17-201ENST00000470444 350 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.24□□□□□ -2.21
HOXA9P31269 AC011406.1-201ENST00000512440 370 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 Y_RNA.691-201ENST00000516611 103 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 RNU6-1198P-201ENST00000516904 67 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 SNORA31.17-201ENST00000516953 127 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 RNU1-117P-201ENST00000517041 158 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 SUMO2P18-201ENST00000518873 252 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 AC009229.3-201ENST00000608056 282 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 AC008873.1-201ENST00000625051 138 ntBASIC1.24□□□□□ -2.21
HOXA9P31269 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.24□□□□□ -2.21
HOXA9P31269 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.24□□□□□ -2.21
HOXA9P31269 Y_RNA.2-201ENST00000362330 96 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 RNU6-222P-201ENST00000362438 107 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 Y_RNA.106-201ENST00000363189 100 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 Y_RNA.166-201ENST00000363730 102 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 RNU6-593P-201ENST00000364716 112 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 RNU6-281P-201ENST00000384212 103 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 Y_RNA.490-201ENST00000384413 102 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 RNU6-541P-201ENST00000384709 110 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 MIR222-201ENST00000384992 110 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.23□□□□□ -2.21
HOXA9P31269 AC016909.1-201ENST00000415916 166 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.23□□□□□ -2.21
HOXA9P31269 AC091179.3-201ENST00000474761 144 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 HMGN1P12-201ENST00000499125 195 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.23□□□□□ -2.21
HOXA9P31269 RNA5SP220-201ENST00000516298 104 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 RNU2-34P-201ENST00000516534 121 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 SNORA20.3-201ENST00000516880 132 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 RNU6-1213P-201ENST00000517075 94 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 RNU6-902P-201ENST00000517212 91 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.23□□□□□ -2.21
HOXA9P31269 MZT1P2-201ENST00000604387 248 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 RMST_2.1-201ENST00000617263 136 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 MIR338-201ENST00000636369 67 ntBASIC1.23□□□□□ -2.21
HOXA9P31269 RNU6-727P-201ENST00000363592 107 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 SNORA33-201ENST00000363664 130 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HOXA9P31269 Y_RNA.415-201ENST00000384012 112 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 RNU6-42P-201ENST00000384165 107 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 RNU6-439P-201ENST00000384188 106 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 MIR320B2-201ENST00000408479 138 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 RNU6-57P-201ENST00000411348 103 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.22□□□□□ -2.21
HOXA9P31269 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.22□□□□□ -2.21
HOXA9P31269 AC116353.2-201ENST00000505332 712 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 Y_RNA.708-201ENST00000516950 96 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 AC134698.4-201ENST00000523451 826 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.22□□□□□ -2.21
HOXA9P31269 AL078603.1-201ENST00000603824 313 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.22□□□□□ -2.21
HOXA9P31269 SNORD11B-201ENST00000607707 90 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.22□□□□□ -2.21
HOXA9P31269 AL078596.1-201ENST00000624856 447 ntBASIC1.22□□□□□ -2.21
HOXA9P31269 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HOXA9P31269 MTND5P16-201ENST00000460269 1703 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 RNY1P16-201ENST00000363063 111 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms