Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RNU6-245P-201ENST00000384020 107 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 RNU6-925P-201ENST00000384629 104 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 AL049545.1-201ENST00000401856 572 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 RNA5SP222-201ENST00000411039 105 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.23□□□□□ -2.37
CD40LGP29965 AC093019.1-201ENST00000443135 252 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 MTCO1P19-201ENST00000443487 500 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 MRPS10P1-201ENST00000448483 130 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 AL356010.1-201ENST00000456364 102 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 AP000870.1-201ENST00000472927 406 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.23□□□□□ -2.37
CD40LGP29965 RNU7-28P-201ENST00000516759 62 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 RNU2-56P-201ENST00000516826 190 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 RNA5SP54-201ENST00000516951 92 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 AC008536.2-201ENST00000607284 349 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 AL136317.1-201ENST00000612653 226 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 AC007014.2-201ENST00000615581 479 ntBASIC0.23□□□□□ -2.37
CD40LGP29965 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CD40LGP29965 MIRLET7D-201ENST00000362263 87 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 Y_RNA.415-201ENST00000384012 112 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 RNU6-784P-201ENST00000384330 106 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 CYCSP46-201ENST00000423569 204 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 MTCYBP10-201ENST00000424905 650 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 SNORD42A-201ENST00000459584 64 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 AC010469.2-201ENST00000496412 480 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.22□□□□□ -2.37
CD40LGP29965 AP003716.2-201ENST00000528260 108 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.22□□□□□ -2.37
CD40LGP29965 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.22□□□□□ -2.37
CD40LGP29965 AC027288.2-201ENST00000553028 243 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.22□□□□□ -2.37
CD40LGP29965 RNU6-94P-201ENST00000607728 107 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 uc_338.34-201ENST00000617467 174 ntBASIC0.22□□□□□ -2.37
CD40LGP29965 MIR103A2-201ENST00000362154 78 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 RNU6-727P-201ENST00000363592 107 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 Y_RNA.267-201ENST00000364679 109 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 RNU6-793P-201ENST00000384233 104 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 MIR521-1-201ENST00000384902 87 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 MIR1185-1-201ENST00000408598 86 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 MTND4LP16-201ENST00000440828 295 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 SNORD11.1-201ENST00000459482 85 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.21□□□□□ -2.38
CD40LGP29965 SNORA25.14-201ENST00000516481 132 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 RNU6-1116P-201ENST00000517269 99 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 AC087854.1-201ENST00000519706 414 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 MTND4P7-201ENST00000523876 130 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 AC090616.2-202ENST00000584248 222 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 7SK.7-201ENST00000603504 247 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 MIR8076-201ENST00000611401 83 ntBASIC0.21□□□□□ -2.38
CD40LGP29965 SNORA1B-201ENST00000362535 133 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 RNU6-1120P-201ENST00000362988 108 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 SNORA25.3-201ENST00000363205 127 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 Y_RNA.118-201ENST00000363300 101 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 RNU6-248P-201ENST00000410720 107 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 RNU6-325P-201ENST00000411132 105 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.2□□□□□ -2.38
CD40LGP29965 MTND4P32-201ENST00000437189 1237 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.2□□□□□ -2.38
CD40LGP29965 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.2□□□□□ -2.38
CD40LGP29965 HMGN2P26-201ENST00000463169 339 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 AC091021.1-201ENST00000468051 388 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.2□□□□□ -2.38
CD40LGP29965 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.2□□□□□ -2.38
CD40LGP29965 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.2□□□□□ -2.38
CD40LGP29965 CPDP1-201ENST00000579660 283 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 AC010487.4-201ENST00000637027 61 ntBASIC0.2□□□□□ -2.38
CD40LGP29965 SNORD115-8-201ENST00000363856 82 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 SNORD115-38-201ENST00000365037 82 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 RNU6-342P-201ENST00000384521 104 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 MIR613-201ENST00000385248 95 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 RNA5SP482-201ENST00000391269 118 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 RNU6-584P-201ENST00000410350 95 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 MRPS18CP6-201ENST00000423587 223 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 MTCO2P11-201ENST00000431069 680 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.19□□□□□ -2.38
CD40LGP29965 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.19□□□□□ -2.38
CD40LGP29965 AC097462.1-201ENST00000514125 324 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 RNU7-172P-201ENST00000517125 64 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 AL157687.1-201ENST00000554853 619 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 MTND4P12-201ENST00000498999 1377 ntBASIC0.19□□□□□ -2.38
CD40LGP29965 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.18□□□□□ -2.38
CD40LGP29965 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 Y_RNA.336-201ENST00000365307 109 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 MTATP6P18-201ENST00000417994 673 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 MTND4P18-201ENST00000447010 465 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AC073415.1-201ENST00000449240 153 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AC067940.1-201ENST00000458411 300 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AC108740.1-201ENST00000498629 225 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AC107401.1-201ENST00000503426 685 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AC092436.3-201ENST00000511788 257 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 RNU6-1129P-201ENST00000515964 104 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 RNU6-341P-201ENST00000516973 96 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AP001372.4-201ENST00000524889 472 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AC036111.3-201ENST00000526389 112 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AC104383.1-201ENST00000530297 370 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.18□□□□□ -2.38
CD40LGP29965 AC091178.2-201ENST00000584401 117 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms