Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 MIR3613-201ENST00000579844 87 ntBASIC2.78□□□□□ -1.96
CTGFP29279 AC090616.3-201ENST00000582184 217 ntBASIC2.78□□□□□ -1.96
CTGFP29279 RNU2-4P-201ENST00000606190 192 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.15-201ENST00000611544 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.16-201ENST00000613119 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.12-201ENST00000613778 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 AC005520.5-201ENST00000613926 164 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.9-201ENST00000615427 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.11-201ENST00000616345 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.2-201ENST00000616535 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.3-201ENST00000617785 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.19-201ENST00000618602 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 RNU2-1-201ENST00000618664 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 AL353997.5-201ENST00000618886 171 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.6-201ENST00000619225 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.5-201ENST00000619465 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 U2.10-201ENST00000620268 191 ntBASIC2.78□□□□□ -1.96
CTGFP29279 AC068700.1-201ENST00000565862 3754 ntBASIC2.78□□□□□ -1.96
CTGFP29279 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
CTGFP29279 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CTGFP29279 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CTGFP29279 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.77□□□□□ -1.97
CTGFP29279 AL021368.2-201ENST00000606125 5352 ntBASIC2.77□□□□□ -1.97
CTGFP29279 RNU6-655P-201ENST00000362858 107 ntBASIC2.77□□□□□ -1.97
CTGFP29279 RNU5F-3P-201ENST00000363767 117 ntBASIC2.77□□□□□ -1.97
CTGFP29279 RNU6-1210P-201ENST00000363775 107 ntBASIC2.77□□□□□ -1.97
CTGFP29279 SNORD116-14-201ENST00000383894 92 ntBASIC2.77□□□□□ -1.97
CTGFP29279 SNORD116-17-201ENST00000383929 92 ntBASIC2.77□□□□□ -1.97
CTGFP29279 RNU6-281P-201ENST00000384212 103 ntBASIC2.77□□□□□ -1.97
CTGFP29279 SNORD116-15-201ENST00000384445 92 ntBASIC2.77□□□□□ -1.97
CTGFP29279 SNORD116-19-201ENST00000384729 92 ntBASIC2.77□□□□□ -1.97
CTGFP29279 RNU1-101P-201ENST00000391171 127 ntBASIC2.77□□□□□ -1.97
CTGFP29279 AL357139.1-201ENST00000407792 426 ntBASIC2.77□□□□□ -1.97
CTGFP29279 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.77□□□□□ -1.97
CTGFP29279 AL121594.1-201ENST00000475906 575 ntBASIC2.77□□□□□ -1.97
CTGFP29279 RN7SKP49-201ENST00000516675 260 ntBASIC2.77□□□□□ -1.97
CTGFP29279 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.77□□□□□ -1.97
CTGFP29279 AP002001.1-203ENST00000534002 267 ntBASIC2.77□□□□□ -1.97
CTGFP29279 MIR3923-201ENST00000579521 83 ntBASIC2.77□□□□□ -1.97
CTGFP29279 MIR3145-201ENST00000580727 82 ntBASIC2.77□□□□□ -1.97
CTGFP29279 SNORA50A-202ENST00000629536 136 ntBASIC2.77□□□□□ -1.97
CTGFP29279 MTND1P7-201ENST00000632801 297 ntBASIC2.77□□□□□ -1.97
CTGFP29279 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTGFP29279 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CTGFP29279 SNORA25.1-201ENST00000362326 128 ntBASIC2.76□□□□□ -1.97
CTGFP29279 RNU6-961P-201ENST00000363893 105 ntBASIC2.76□□□□□ -1.97
CTGFP29279 Y_RNA.435-201ENST00000384095 112 ntBASIC2.76□□□□□ -1.97
CTGFP29279 MIR208B-201ENST00000401172 77 ntBASIC2.76□□□□□ -1.97
CTGFP29279 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.76□□□□□ -1.97
CTGFP29279 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.76□□□□□ -1.97
CTGFP29279 AC007395.1-201ENST00000451333 677 ntBASIC2.76□□□□□ -1.97
CTGFP29279 AC007215.1-201ENST00000464893 276 ntBASIC2.76□□□□□ -1.97
CTGFP29279 RN7SKP282-201ENST00000516824 299 ntBASIC2.76□□□□□ -1.97
CTGFP29279 RNU7-110P-201ENST00000516891 62 ntBASIC2.76□□□□□ -1.97
CTGFP29279 SUMO2P18-201ENST00000518873 252 ntBASIC2.76□□□□□ -1.97
CTGFP29279 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.76□□□□□ -1.97
CTGFP29279 AC055872.1-201ENST00000570978 278 ntBASIC2.76□□□□□ -1.97
CTGFP29279 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.76□□□□□ -1.97
CTGFP29279 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.76□□□□□ -1.97
CTGFP29279 AL356575.1-201ENST00000603008 283 ntBASIC2.76□□□□□ -1.97
CTGFP29279 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.76□□□□□ -1.97
CTGFP29279 Y_RNA.778-201ENST00000620203 90 ntBASIC2.76□□□□□ -1.97
CTGFP29279 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.76□□□□□ -1.97
CTGFP29279 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CTGFP29279 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CTGFP29279 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CTGFP29279 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CTGFP29279 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CTGFP29279 UBE2WP1-201ENST00000362030 340 ntBASIC2.75□□□□□ -1.97
CTGFP29279 RNU4-84P-201ENST00000364200 139 ntBASIC2.75□□□□□ -1.97
CTGFP29279 RNU6-1083P-201ENST00000384022 107 ntBASIC2.75□□□□□ -1.97
CTGFP29279 SNORD63-201ENST00000384262 68 ntBASIC2.75□□□□□ -1.97
CTGFP29279 Y_RNA.542-201ENST00000384641 111 ntBASIC2.75□□□□□ -1.97
CTGFP29279 Y_RNA.571-201ENST00000384753 98 ntBASIC2.75□□□□□ -1.97
CTGFP29279 RNA5SP210-201ENST00000391034 120 ntBASIC2.75□□□□□ -1.97
CTGFP29279 CBX3P9-201ENST00000402326 552 ntBASIC2.75□□□□□ -1.97
CTGFP29279 SNORD12B-201ENST00000410433 91 ntBASIC2.75□□□□□ -1.97
CTGFP29279 RNU6-1001P-201ENST00000411265 100 ntBASIC2.75□□□□□ -1.97
CTGFP29279 AC016925.1-201ENST00000458303 298 ntBASIC2.75□□□□□ -1.97
CTGFP29279 RNU7-107P-201ENST00000459121 61 ntBASIC2.75□□□□□ -1.97
CTGFP29279 RPL26P26-201ENST00000480251 434 ntBASIC2.75□□□□□ -1.97
CTGFP29279 CYCTP-201ENST00000504253 315 ntBASIC2.75□□□□□ -1.97
CTGFP29279 AC026436.1-201ENST00000510537 270 ntBASIC2.75□□□□□ -1.97
CTGFP29279 RNA5SP458-201ENST00000516188 119 ntBASIC2.75□□□□□ -1.97
CTGFP29279 AC068657.1-201ENST00000520807 306 ntBASIC2.75□□□□□ -1.97
CTGFP29279 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.75□□□□□ -1.97
CTGFP29279 AC008749.1-201ENST00000597650 306 ntBASIC2.75□□□□□ -1.97
CTGFP29279 UCA1.1-201ENST00000620952 75 ntBASIC2.75□□□□□ -1.97
CTGFP29279 AC002064.3-201ENST00000623448 346 ntBASIC2.75□□□□□ -1.97
CTGFP29279 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CTGFP29279 AC016717.2-201ENST00000609089 5141 ntBASIC2.75□□□□□ -1.97
CTGFP29279 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CTGFP29279 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.74□□□□□ -1.97
CTGFP29279 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CTGFP29279 RNU6-873P-201ENST00000363833 107 ntBASIC2.74□□□□□ -1.97
CTGFP29279 RNA5SP456-201ENST00000364002 114 ntBASIC2.74□□□□□ -1.97
CTGFP29279 RNU4-11P-201ENST00000365287 132 ntBASIC2.74□□□□□ -1.97
CTGFP29279 CD24P4-201ENST00000382840 243 ntBASIC2.74□□□□□ -1.97
CTGFP29279 RNA5SP201-201ENST00000410316 124 ntBASIC2.74□□□□□ -1.97
CTGFP29279 EBAG9P1-201ENST00000418955 543 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms