Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RNU6-862P-201ENST00000362804 105 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 RNY1P10-201ENST00000363268 113 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 Y_RNA.142-201ENST00000363491 102 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 RNU6-439P-201ENST00000384188 106 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 RNU6-296P-201ENST00000384608 107 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 RNU6-700P-201ENST00000391043 107 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 MIR190B-201ENST00000401119 79 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 USP9YP16-201ENST00000430287 407 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 AC099677.2-201ENST00000436385 175 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 MTND4P18-201ENST00000447010 465 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 HSPE1P24-201ENST00000450782 238 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 USP9YP23-201ENST00000455085 407 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.49□□□□□ -2.17
PTPN4P29074 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.49□□□□□ -2.17
PTPN4P29074 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 RNU7-57P-201ENST00000459540 60 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.49□□□□□ -2.17
PTPN4P29074 AC005840.1-201ENST00000498412 377 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.49□□□□□ -2.17
PTPN4P29074 AC024995.1-201ENST00000523014 93 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 AK6P2-201ENST00000549020 471 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.49□□□□□ -2.17
PTPN4P29074 AL121579.1-201ENST00000555129 305 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 MIR5695-201ENST00000579717 85 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 AL645939.4-201ENST00000604495 135 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.49□□□□□ -2.17
PTPN4P29074 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.49□□□□□ -2.17
PTPN4P29074 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.49□□□□□ -2.17
PTPN4P29074 AL161722.3-201ENST00000605789 2983 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 RNU6-1188P-201ENST00000363795 107 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 SNORD87-201ENST00000364849 89 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 Y_RNA.415-201ENST00000384012 112 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 RNU6-793P-201ENST00000384233 104 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 MIR517C-201ENST00000385103 95 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
PTPN4P29074 AL117342.1-201ENST00000404861 406 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 MIR1253-201ENST00000408273 105 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 MTCYBP10-201ENST00000424905 650 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 AC245517.4-201ENST00000448601 281 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 AC009474.2-201ENST00000451383 136 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.48□□□□□ -2.17
PTPN4P29074 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.48□□□□□ -2.17
PTPN4P29074 AC093303.1-201ENST00000514549 295 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 RNU6-1041P-201ENST00000516254 102 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 RNU6-307P-201ENST00000516743 106 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 APOOP3-201ENST00000536787 586 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.48□□□□□ -2.17
PTPN4P29074 AP001485.1-201ENST00000604799 199 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 AC113139.1-201ENST00000605049 239 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 AC092794.2-201ENST00000620933 563 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 snoZ196.1-201ENST00000625269 89 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PTPN4P29074 MTND5P16-201ENST00000460269 1703 ntBASIC1.48□□□□□ -2.17
PTPN4P29074 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PTPN4P29074 snoU2-30.2-201ENST00000362805 70 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 RNU6-727P-201ENST00000363592 107 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 SNORA63D-201ENST00000364359 132 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 Y_RNA.364-201ENST00000365532 101 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 RNU6-281P-201ENST00000384212 103 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 RNU6-950P-201ENST00000384651 107 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 RNU6-310P-201ENST00000384655 107 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 MIR548B-201ENST00000385247 97 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 Y_RNA.646-201ENST00000410980 101 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 RNU6-57P-201ENST00000411348 103 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 JTBP1-201ENST00000441314 247 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 AC091951.2-201ENST00000500762 203 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 RNU6-277P-201ENST00000516272 106 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 Y_RNA.675-201ENST00000516389 149 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.47□□□□□ -2.17
PTPN4P29074 MZT1P2-201ENST00000604387 248 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 AC010999.1-201ENST00000611856 324 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.47□□□□□ -2.17
PTPN4P29074 U3.8-201ENST00000363675 217 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 Y_RNA.179-201ENST00000363844 90 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 SNORA75.6-201ENST00000391318 127 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 RN7SKP51-201ENST00000410781 304 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 RNU6-1304P-201ENST00000411374 106 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.46□□□□□ -2.18
PTPN4P29074 EIF1P2-201ENST00000428233 350 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 HSPE1P9-201ENST00000440046 311 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.46□□□□□ -2.18
PTPN4P29074 AC005908.1-201ENST00000468701 347 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 RPL17P19-201ENST00000489069 552 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.46□□□□□ -2.18
PTPN4P29074 RNU6-559P-201ENST00000516151 98 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.46□□□□□ -2.18
PTPN4P29074 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.46□□□□□ -2.18
PTPN4P29074 AC004584.2-201ENST00000570407 410 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 AC090617.3-201ENST00000573670 475 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.46□□□□□ -2.18
PTPN4P29074 MIR5690-201ENST00000583739 73 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 AC125232.2-201ENST00000592457 143 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms