Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VARSP26640 SNORD35B-201ENST00000363660 87 ntBASIC3.94□□□□□ -1.78
VARSP26640 RNU6-438P-201ENST00000365561 103 ntBASIC3.94□□□□□ -1.78
VARSP26640 MIR449B-201ENST00000384995 97 ntBASIC3.94□□□□□ -1.78
VARSP26640 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.94□□□□□ -1.78
VARSP26640 RN7SL542P-201ENST00000467147 294 ntBASIC3.94□□□□□ -1.78
VARSP26640 RPL29P14-201ENST00000495837 428 ntBASIC3.94□□□□□ -1.78
VARSP26640 RNY4P20-201ENST00000516678 93 ntBASIC3.94□□□□□ -1.78
VARSP26640 RNU6-158P-201ENST00000517104 100 ntBASIC3.94□□□□□ -1.78
VARSP26640 RNU1-45P-201ENST00000517191 141 ntBASIC3.94□□□□□ -1.78
VARSP26640 MIR5684-201ENST00000585074 65 ntBASIC3.94□□□□□ -1.78
VARSP26640 AC134878.1-201ENST00000619901 243 ntBASIC3.94□□□□□ -1.78
VARSP26640 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VARSP26640 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.94□□□□□ -1.78
VARSP26640 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
VARSP26640 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VARSP26640 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VARSP26640 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VARSP26640 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
VARSP26640 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VARSP26640 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VARSP26640 Y_RNA.219-201ENST00000364232 113 ntBASIC3.93□□□□□ -1.78
VARSP26640 RNU6-1134P-201ENST00000365156 101 ntBASIC3.93□□□□□ -1.78
VARSP26640 SNORD24-201ENST00000383884 75 ntBASIC3.93□□□□□ -1.78
VARSP26640 RNU6-1274P-201ENST00000384557 107 ntBASIC3.93□□□□□ -1.78
VARSP26640 SNORA11.1-201ENST00000408133 129 ntBASIC3.93□□□□□ -1.78
VARSP26640 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.93□□□□□ -1.78
VARSP26640 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.93□□□□□ -1.78
VARSP26640 PGBD4P5-201ENST00000445958 426 ntBASIC3.93□□□□□ -1.78
VARSP26640 AL133162.1-201ENST00000463228 453 ntBASIC3.93□□□□□ -1.78
VARSP26640 RNU6-830P-201ENST00000516353 107 ntBASIC3.93□□□□□ -1.78
VARSP26640 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.93□□□□□ -1.78
VARSP26640 AC103810.1-201ENST00000579873 453 ntBASIC3.93□□□□□ -1.78
VARSP26640 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VARSP26640 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.93□□□□□ -1.78
VARSP26640 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VARSP26640 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VARSP26640 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.92□□□□□ -1.78
VARSP26640 SNORA60-201ENST00000362396 134 ntBASIC3.92□□□□□ -1.78
VARSP26640 Y_RNA.78-201ENST00000362970 110 ntBASIC3.92□□□□□ -1.78
VARSP26640 RNU1-18P-201ENST00000363062 164 ntBASIC3.92□□□□□ -1.78
VARSP26640 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.92□□□□□ -1.78
VARSP26640 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.92□□□□□ -1.78
VARSP26640 CYCSP19-201ENST00000411715 316 ntBASIC3.92□□□□□ -1.78
VARSP26640 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.92□□□□□ -1.78
VARSP26640 AC107297.1-201ENST00000459991 176 ntBASIC3.92□□□□□ -1.78
VARSP26640 RPS26P48-201ENST00000491713 339 ntBASIC3.92□□□□□ -1.78
VARSP26640 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.92□□□□□ -1.78
VARSP26640 AC025627.2-201ENST00000576220 160 ntBASIC3.92□□□□□ -1.78
VARSP26640 MIR6867-201ENST00000610636 67 ntBASIC3.92□□□□□ -1.78
VARSP26640 MIR8058-201ENST00000615737 89 ntBASIC3.92□□□□□ -1.78
VARSP26640 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.91□□□□□ -1.78
VARSP26640 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VARSP26640 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.91□□□□□ -1.78
VARSP26640 SNRPGP10-201ENST00000432323 225 ntBASIC3.91□□□□□ -1.78
VARSP26640 RN7SL93P-201ENST00000463035 293 ntBASIC3.91□□□□□ -1.78
VARSP26640 HMGN1P7-201ENST00000491722 313 ntBASIC3.91□□□□□ -1.78
VARSP26640 AC006445.1-201ENST00000491925 405 ntBASIC3.91□□□□□ -1.78
VARSP26640 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.91□□□□□ -1.78
VARSP26640 SNORD59.2-201ENST00000516873 68 ntBASIC3.91□□□□□ -1.78
VARSP26640 AC026421.1-201ENST00000519101 163 ntBASIC3.91□□□□□ -1.78
VARSP26640 AC068657.1-201ENST00000520807 306 ntBASIC3.91□□□□□ -1.78
VARSP26640 AC084364.2-201ENST00000546924 395 ntBASIC3.91□□□□□ -1.78
VARSP26640 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.91□□□□□ -1.78
VARSP26640 MIR6875-201ENST00000617506 72 ntBASIC3.91□□□□□ -1.78
VARSP26640 AL590808.1-201ENST00000618696 141 ntBASIC3.91□□□□□ -1.78
VARSP26640 MIR376A2-201ENST00000636782 80 ntBASIC3.91□□□□□ -1.78
VARSP26640 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
VARSP26640 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VARSP26640 MIR372-201ENST00000362225 67 ntBASIC3.9□□□□□ -1.79
VARSP26640 SNORA63D-201ENST00000364359 132 ntBASIC3.9□□□□□ -1.79
VARSP26640 RNA5SP130-201ENST00000364431 114 ntBASIC3.9□□□□□ -1.79
VARSP26640 MIR7-3-201ENST00000384898 110 ntBASIC3.9□□□□□ -1.79
VARSP26640 MIR548A2-201ENST00000384956 97 ntBASIC3.9□□□□□ -1.79
VARSP26640 MT-TI-201ENST00000387365 69 ntBASIC3.9□□□□□ -1.79
VARSP26640 RNU6-904P-201ENST00000516206 101 ntBASIC3.9□□□□□ -1.79
VARSP26640 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.9□□□□□ -1.79
VARSP26640 MIR4765-201ENST00000585007 77 ntBASIC3.9□□□□□ -1.79
VARSP26640 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
VARSP26640 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.9□□□□□ -1.79
VARSP26640 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
VARSP26640 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
VARSP26640 MIR302B-201ENST00000362188 73 ntBASIC3.89□□□□□ -1.79
VARSP26640 RNU6-486P-201ENST00000363116 107 ntBASIC3.89□□□□□ -1.79
VARSP26640 RNY1P10-201ENST00000363268 113 ntBASIC3.89□□□□□ -1.79
VARSP26640 RNU6-690P-201ENST00000365242 106 ntBASIC3.89□□□□□ -1.79
VARSP26640 Y_RNA.342-201ENST00000365352 113 ntBASIC3.89□□□□□ -1.79
VARSP26640 MIR520G-201ENST00000385064 90 ntBASIC3.89□□□□□ -1.79
VARSP26640 RPL21P65-201ENST00000406094 466 ntBASIC3.89□□□□□ -1.79
VARSP26640 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.89□□□□□ -1.79
VARSP26640 SNRPGP13-201ENST00000442212 177 ntBASIC3.89□□□□□ -1.79
VARSP26640 AL133547.1-201ENST00000448546 220 ntBASIC3.89□□□□□ -1.79
VARSP26640 RN7SL271P-201ENST00000487601 295 ntBASIC3.89□□□□□ -1.79
VARSP26640 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VARSP26640 AL049781.1-201ENST00000623195 3585 ntBASIC3.89□□□□□ -1.79
VARSP26640 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VARSP26640 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VARSP26640 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.88□□□□□ -1.79
VARSP26640 Y_RNA.265-201ENST00000364677 108 ntBASIC3.88□□□□□ -1.79
VARSP26640 Y_RNA.344-201ENST00000365381 112 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms