Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD44P16070 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD44P16070 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
CD44P16070 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD44P16070 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
CD44P16070 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD44P16070 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD44P16070 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
CD44P16070 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD44P16070 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CD44P16070 MIR331-201ENST00000362302 94 ntBASIC4.79□□□□□ -1.64
CD44P16070 SNORA25.6-201ENST00000364121 118 ntBASIC4.79□□□□□ -1.64
CD44P16070 SNORD77.2-201ENST00000391045 68 ntBASIC4.79□□□□□ -1.64
CD44P16070 RNU6-630P-201ENST00000391258 106 ntBASIC4.79□□□□□ -1.64
CD44P16070 PTMAP2-201ENST00000397627 327 ntBASIC4.79□□□□□ -1.64
CD44P16070 IFITM8P-201ENST00000522529 394 ntBASIC4.79□□□□□ -1.64
CD44P16070 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.79□□□□□ -1.64
CD44P16070 MTND5P40-201ENST00000559945 246 ntBASIC4.79□□□□□ -1.64
CD44P16070 MIR432-201ENST00000606207 94 ntBASIC4.79□□□□□ -1.64
CD44P16070 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CD44P16070 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD44P16070 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CD44P16070 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.79□□□□□ -1.64
CD44P16070 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CD44P16070 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD44P16070 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD44P16070 RNA5SP261-201ENST00000410536 106 ntBASIC4.78□□□□□ -1.64
CD44P16070 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.78□□□□□ -1.64
CD44P16070 AC073264.2-201ENST00000448886 166 ntBASIC4.78□□□□□ -1.64
CD44P16070 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.78□□□□□ -1.64
CD44P16070 AC110768.1-201ENST00000509222 400 ntBASIC4.78□□□□□ -1.64
CD44P16070 RNA5SP468-201ENST00000516782 93 ntBASIC4.78□□□□□ -1.64
CD44P16070 uc_338.25-201ENST00000613756 156 ntBASIC4.78□□□□□ -1.64
CD44P16070 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD44P16070 AC000123.3-201ENST00000624029 4975 ntBASIC4.78□□□□□ -1.64
CD44P16070 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD44P16070 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD44P16070 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CD44P16070 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.78□□□□□ -1.64
CD44P16070 USP8P1-201ENST00000494673 3183 ntBASIC4.77□□□□□ -1.65
CD44P16070 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.77□□□□□ -1.65
CD44P16070 RNU6-50P-201ENST00000362356 103 ntBASIC4.77□□□□□ -1.65
CD44P16070 SNORA25.4-201ENST00000363666 124 ntBASIC4.77□□□□□ -1.65
CD44P16070 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD44P16070 RN7SKP192-201ENST00000411291 327 ntBASIC4.77□□□□□ -1.65
CD44P16070 MIR1248-201ENST00000629190 106 ntBASIC4.77□□□□□ -1.65
CD44P16070 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD44P16070 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD44P16070 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.77□□□□□ -1.65
CD44P16070 AC022893.2-201ENST00000564832 3296 ntBASIC4.77□□□□□ -1.65
CD44P16070 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD44P16070 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD44P16070 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.76□□□□□ -1.65
CD44P16070 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD44P16070 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CD44P16070 Y_RNA.264-201ENST00000364665 102 ntBASIC4.76□□□□□ -1.65
CD44P16070 RPL37P18-201ENST00000411602 243 ntBASIC4.76□□□□□ -1.65
CD44P16070 AL162591.2-201ENST00000449634 317 ntBASIC4.76□□□□□ -1.65
CD44P16070 RNU7-85P-201ENST00000458851 63 ntBASIC4.76□□□□□ -1.65
CD44P16070 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.76□□□□□ -1.65
CD44P16070 RNU6-977P-201ENST00000516411 103 ntBASIC4.76□□□□□ -1.65
CD44P16070 AC006064.5-201ENST00000541782 248 ntBASIC4.76□□□□□ -1.65
CD44P16070 MIR6717-201ENST00000622747 73 ntBASIC4.76□□□□□ -1.65
CD44P16070 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CD44P16070 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.76□□□□□ -1.65
CD44P16070 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CD44P16070 MAPK10-320ENST00000641462 6696 ntBASIC4.76□□□□□ -1.65
CD44P16070 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CD44P16070 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CD44P16070 SCN1A-220ENST00000641603 12506 ntBASIC4.75□□□□□ -1.65
CD44P16070 LINC01355-201ENST00000566551 5444 ntBASIC4.75□□□□□ -1.65
CD44P16070 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
CD44P16070 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CD44P16070 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CD44P16070 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CD44P16070 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CD44P16070 AC011266.1-201ENST00000624119 3569 ntBASIC4.75□□□□□ -1.65
CD44P16070 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CD44P16070 MIR1267-201ENST00000408723 78 ntBASIC4.75□□□□□ -1.65
CD44P16070 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.75□□□□□ -1.65
CD44P16070 RN7SL812P-201ENST00000493791 279 ntBASIC4.75□□□□□ -1.65
CD44P16070 RNU1-142P-201ENST00000516682 145 ntBASIC4.75□□□□□ -1.65
CD44P16070 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.75□□□□□ -1.65
CD44P16070 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CD44P16070 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CD44P16070 RNA5SP388-201ENST00000362584 119 ntBASIC4.74□□□□□ -1.65
CD44P16070 RNA5SP505-201ENST00000364748 108 ntBASIC4.74□□□□□ -1.65
CD44P16070 RNU6-669P-201ENST00000365575 107 ntBASIC4.74□□□□□ -1.65
CD44P16070 MIR93-201ENST00000385024 80 ntBASIC4.74□□□□□ -1.65
CD44P16070 Z98742.2-201ENST00000431564 187 ntBASIC4.74□□□□□ -1.65
CD44P16070 CST9LP2-201ENST00000437612 320 ntBASIC4.74□□□□□ -1.65
CD44P16070 RNU7-94P-201ENST00000459576 63 ntBASIC4.74□□□□□ -1.65
CD44P16070 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.74□□□□□ -1.65
CD44P16070 SEM1P1-201ENST00000506694 209 ntBASIC4.74□□□□□ -1.65
CD44P16070 RNU6-965P-201ENST00000516721 96 ntBASIC4.74□□□□□ -1.65
CD44P16070 RNU7-181P-201ENST00000517234 74 ntBASIC4.74□□□□□ -1.65
CD44P16070 DNAJC19P9-201ENST00000555084 351 ntBASIC4.74□□□□□ -1.65
CD44P16070 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC4.74□□□□□ -1.65
CD44P16070 AL512598.1-201ENST00000610158 273 ntBASIC4.74□□□□□ -1.65
CD44P16070 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms