Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RNU4-84P-201ENST00000364200 139 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 DYNLT3P1-201ENST00000378574 347 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 RNU6-966P-201ENST00000516479 104 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.73□□□□□ -1.97
COL11A2P13942 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.73□□□□□ -1.97
COL11A2P13942 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.73□□□□□ -1.97
COL11A2P13942 MIR3923-201ENST00000579521 83 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL11A2P13942 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.73□□□□□ -1.97
COL11A2P13942 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL11A2P13942 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
COL11A2P13942 Y_RNA.23-201ENST00000362496 106 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 RNU6-454P-201ENST00000364292 107 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.73□□□□□ -1.97
COL11A2P13942 HSPE1P26-201ENST00000405341 275 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 AC092427.1-202ENST00000430569 476 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 RN7SKP282-201ENST00000516824 299 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 AC115990.1-201ENST00000526957 301 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 XIST_intron.1-201ENST00000619444 68 ntBASIC2.73□□□□□ -1.97
COL11A2P13942 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.72□□□□□ -1.97
COL11A2P13942 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL11A2P13942 RNU1-62P-201ENST00000362599 164 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 RNU6-1290P-201ENST00000362957 109 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 RNU4-80P-201ENST00000363200 141 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 RNU6-799P-201ENST00000363567 107 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 RNU6-727P-201ENST00000363592 107 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 Y_RNA.329-201ENST00000365209 107 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 RNU6-793P-201ENST00000384233 104 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 SNORA1.3-201ENST00000384676 136 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 BTF3P11-201ENST00000426582 477 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 AL162725.1-201ENST00000435405 301 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 snoU13.28-201ENST00000459235 104 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.72□□□□□ -1.97
COL11A2P13942 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.72□□□□□ -1.97
COL11A2P13942 RNU1-61P-201ENST00000516107 151 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 SCARNA16.3-201ENST00000516595 184 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.72□□□□□ -1.97
COL11A2P13942 MIR4431-201ENST00000579990 94 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 AC013791.1-201ENST00000616619 62 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 SNORD98-201ENST00000636377 67 ntBASIC2.72□□□□□ -1.97
COL11A2P13942 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
COL11A2P13942 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.72□□□□□ -1.97
COL11A2P13942 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL11A2P13942 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
COL11A2P13942 Y_RNA.226-201ENST00000364337 114 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 Y_RNA.357-201ENST00000365487 109 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 Y_RNA.568-201ENST00000384742 113 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 MIR549A-201ENST00000385268 96 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 RNU6-131P-201ENST00000391144 107 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 RNA5SP201-201ENST00000410316 124 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 Y_RNA.629-201ENST00000411368 105 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 AC096649.2-201ENST00000416186 393 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 CYCSP48-201ENST00000417124 323 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.71□□□□□ -1.98
COL11A2P13942 snoU13.6-201ENST00000458785 104 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 ACA59.2-201ENST00000517061 156 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.71□□□□□ -1.98
COL11A2P13942 AC105137.2-201ENST00000569073 466 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 MIR3684-201ENST00000579779 74 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 MIR4744-201ENST00000581563 82 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 MIR4506-201ENST00000584693 77 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 HMGN2P15-201ENST00000585707 270 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 TCL6_2.1-201ENST00000615162 119 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 AL078604.3-201ENST00000615580 211 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 AC009831.4-201ENST00000620744 325 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 MIR3199-2-201ENST00000636243 86 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
COL11A2P13942 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL11A2P13942 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL11A2P13942 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL11A2P13942 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.71□□□□□ -1.98
COL11A2P13942 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL11A2P13942 Y_RNA.412-201ENST00000384001 104 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 Y_RNA.488-201ENST00000384403 102 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 CR769767.1-201ENST00000436337 346 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.71□□□□□ -1.98
COL11A2P13942 Y_RNA.637-201ENST00000459424 114 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 AL121594.1-201ENST00000475906 575 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 RNU6-155P-201ENST00000516347 100 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.71□□□□□ -1.98
COL11A2P13942 RNU2-4P-201ENST00000606190 192 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 AL110115.1-201ENST00000614396 364 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 AL353997.5-201ENST00000618886 171 ntBASIC2.71□□□□□ -1.98
COL11A2P13942 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
COL11A2P13942 RNA5SP167-201ENST00000365461 116 ntBASIC2.7□□□□□ -1.98
COL11A2P13942 RNU4-17P-201ENST00000365598 141 ntBASIC2.7□□□□□ -1.98
COL11A2P13942 AC091179.1-201ENST00000461606 579 ntBASIC2.7□□□□□ -1.98
COL11A2P13942 RPL23AP42-201ENST00000471152 471 ntBASIC2.7□□□□□ -1.98
COL11A2P13942 RNU6-191P-201ENST00000516295 94 ntBASIC2.7□□□□□ -1.98
COL11A2P13942 SUMO2P18-201ENST00000518873 252 ntBASIC2.7□□□□□ -1.98
COL11A2P13942 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.7□□□□□ -1.98
COL11A2P13942 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.7□□□□□ -1.98
COL11A2P13942 AC012531.5-201ENST00000611375 151 ntBASIC2.7□□□□□ -1.98
COL11A2P13942 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.7□□□□□ -1.98
COL11A2P13942 MIR3674-201ENST00000636576 68 ntBASIC2.7□□□□□ -1.98
COL11A2P13942 AC091152.2-201ENST00000591628 2569 ntBASIC2.69□□□□□ -1.98
COL11A2P13942 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms