Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AL355796.1-201ENST00000406706 323 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 RNU6-57P-201ENST00000411348 103 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.18□□□□□ -1.9
ITGA4P13612 AC016717.1-201ENST00000448918 286 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 RN7SL633P-201ENST00000488974 297 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.18□□□□□ -1.9
ITGA4P13612 RNU7-200P-201ENST00000516105 62 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 RNU6-346P-201ENST00000516288 111 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 GTF3AP2-201ENST00000557014 266 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 MIR3684-201ENST00000579779 74 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 ELOCP29-201ENST00000588193 334 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 snoZ196.1-201ENST00000625269 89 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 AL035425.3-201ENST00000564206 4996 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ITGA4P13612 Y_RNA.172-201ENST00000363765 102 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 Y_RNA.182-201ENST00000363880 111 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 RNU6-899P-201ENST00000363947 107 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 SNORA68.1-201ENST00000364537 132 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 SNORD31B-201ENST00000364977 69 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 Y_RNA.412-201ENST00000384001 104 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 Y_RNA.441-201ENST00000384123 112 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 Y_RNA.500-201ENST00000384466 111 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ITGA4P13612 RNU6-381P-201ENST00000391259 108 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 MIR1289-1-201ENST00000408836 144 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 RPS20P10-201ENST00000451209 253 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 AC069294.1-201ENST00000608397 350 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ITGA4P13612 AC080128.1-201ENST00000474389 1917 ntBASIC3.17□□□□□ -1.9
ITGA4P13612 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.17□□□□□ -1.9
ITGA4P13612 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.17□□□□□ -1.9
ITGA4P13612 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
ITGA4P13612 Y_RNA.121-201ENST00000363309 113 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 RNY1P5-201ENST00000383890 115 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 SNORA20B-201ENST00000384220 132 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 MIR873-201ENST00000401120 77 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 AL355497.1-201ENST00000406262 551 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 AL121890.1-201ENST00000435457 205 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 RPS29P6-201ENST00000438196 145 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 RPL23AP7-203ENST00000449021 469 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 RNU7-141P-201ENST00000459304 62 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 RNU6-221P-201ENST00000459541 99 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 UBE2DNL-203ENST00000474922 222 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.16□□□□□ -1.9
ITGA4P13612 AC021269.2-201ENST00000532318 330 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ITGA4P13612 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.16□□□□□ -1.9
ITGA4P13612 AC108706.1-201ENST00000611053 297 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ITGA4P13612 MIR1248-201ENST00000629190 106 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ITGA4P13612 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ITGA4P13612 Z82209.1-201ENST00000422141 2135 ntBASIC3.16□□□□□ -1.9
ITGA4P13612 FO393413.1-201ENST00000402892 195 ntBASIC3.15□□□□□ -1.91
ITGA4P13612 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.15□□□□□ -1.91
ITGA4P13612 AC016925.1-201ENST00000458303 298 ntBASIC3.15□□□□□ -1.91
ITGA4P13612 RPS27AP9-201ENST00000477681 438 ntBASIC3.15□□□□□ -1.91
ITGA4P13612 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.15□□□□□ -1.91
ITGA4P13612 RNA5SP356-201ENST00000515972 94 ntBASIC3.15□□□□□ -1.91
ITGA4P13612 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.15□□□□□ -1.91
ITGA4P13612 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.15□□□□□ -1.91
ITGA4P13612 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.15□□□□□ -1.91
ITGA4P13612 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ITGA4P13612 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ITGA4P13612 SNORD114-7-201ENST00000362520 77 ntBASIC3.14□□□□□ -1.91
ITGA4P13612 Y_RNA.75-201ENST00000362927 97 ntBASIC3.14□□□□□ -1.91
ITGA4P13612 Y_RNA.272-201ENST00000364696 102 ntBASIC3.14□□□□□ -1.91
ITGA4P13612 SNORA8.3-201ENST00000384679 139 ntBASIC3.14□□□□□ -1.91
ITGA4P13612 Y_RNA.572-201ENST00000384757 98 ntBASIC3.14□□□□□ -1.91
ITGA4P13612 AC105272.1-201ENST00000438604 198 ntBASIC3.14□□□□□ -1.91
ITGA4P13612 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.14□□□□□ -1.91
ITGA4P13612 SNORD65B-201ENST00000459126 73 ntBASIC3.14□□□□□ -1.91
ITGA4P13612 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.14□□□□□ -1.91
ITGA4P13612 AC027419.1-201ENST00000522976 328 ntBASIC3.14□□□□□ -1.91
ITGA4P13612 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.14□□□□□ -1.91
ITGA4P13612 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
ITGA4P13612 SNORA27.1-201ENST00000362604 124 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 snoU2_19.4-201ENST00000364329 80 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 RNU6-438P-201ENST00000365561 103 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 SNORD116-18-201ENST00000383961 92 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 RNU6-546P-201ENST00000383991 107 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 RNU6-418P-201ENST00000384035 107 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 MIR626-201ENST00000385032 94 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 SNORA11.2-201ENST00000408318 127 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 RNU2-32P-201ENST00000411193 191 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.13□□□□□ -1.91
ITGA4P13612 AC087499.2-201ENST00000432861 149 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 SEPT7P4-201ENST00000437076 306 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 HSPE1P21-201ENST00000438283 308 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 AC023141.11-201ENST00000508864 202 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 RN7SKP132-201ENST00000516001 208 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 RN7SKP164-201ENST00000516138 266 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 RNU6-1337P-201ENST00000516525 95 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 AC006023.1-201ENST00000603944 259 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 AC004832.4-201ENST00000608952 331 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 Y_RNA.802-201ENST00000614892 130 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 MIR5739-201ENST00000619803 80 ntBASIC3.13□□□□□ -1.91
ITGA4P13612 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ITGA4P13612 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 554.7 ms