Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 Y_RNA.570-201ENST00000384750 101 ntBASIC2.05□□□□□ -2.08
CDH1P12830 MIR548B-201ENST00000385247 97 ntBASIC2.05□□□□□ -2.08
CDH1P12830 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
CDH1P12830 MIR300-201ENST00000401138 83 ntBASIC2.05□□□□□ -2.08
CDH1P12830 MIR1283-1-201ENST00000408494 87 ntBASIC2.05□□□□□ -2.08
CDH1P12830 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.05□□□□□ -2.08
CDH1P12830 NDUFB4P10-201ENST00000452541 359 ntBASIC2.05□□□□□ -2.08
CDH1P12830 AC016925.1-201ENST00000458303 298 ntBASIC2.05□□□□□ -2.08
CDH1P12830 RNU7-26P-201ENST00000458980 63 ntBASIC2.05□□□□□ -2.08
CDH1P12830 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.05□□□□□ -2.08
CDH1P12830 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
CDH1P12830 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
CDH1P12830 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
CDH1P12830 RNU6-667P-201ENST00000517186 102 ntBASIC2.05□□□□□ -2.08
CDH1P12830 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH1P12830 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH1P12830 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH1P12830 AC091544.4-201ENST00000555268 342 ntBASIC2.05□□□□□ -2.08
CDH1P12830 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH1P12830 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDH1P12830 snoU2_19.2-201ENST00000363024 80 ntBASIC2.04□□□□□ -2.08
CDH1P12830 U3.8-201ENST00000363675 217 ntBASIC2.04□□□□□ -2.08
CDH1P12830 SNORA38-201ENST00000363946 132 ntBASIC2.04□□□□□ -2.08
CDH1P12830 RNU6-1305P-201ENST00000364353 104 ntBASIC2.04□□□□□ -2.08
CDH1P12830 RNU6-1264P-201ENST00000383891 107 ntBASIC2.04□□□□□ -2.08
CDH1P12830 RNU6-1026P-201ENST00000384465 108 ntBASIC2.04□□□□□ -2.08
CDH1P12830 RNU6-713P-201ENST00000384761 107 ntBASIC2.04□□□□□ -2.08
CDH1P12830 MIR215-201ENST00000384858 110 ntBASIC2.04□□□□□ -2.08
CDH1P12830 AL357139.1-201ENST00000407792 426 ntBASIC2.04□□□□□ -2.08
CDH1P12830 U3.40-201ENST00000408706 208 ntBASIC2.04□□□□□ -2.08
CDH1P12830 RNA5SP425-201ENST00000410336 112 ntBASIC2.04□□□□□ -2.08
CDH1P12830 RN7SKP223-201ENST00000410582 62 ntBASIC2.04□□□□□ -2.08
CDH1P12830 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH1P12830 RNA5SP490-201ENST00000517141 136 ntBASIC2.04□□□□□ -2.08
CDH1P12830 MIR1273D-201ENST00000577266 86 ntBASIC2.04□□□□□ -2.08
CDH1P12830 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH1P12830 AC005176.2-201ENST00000596933 147 ntBASIC2.04□□□□□ -2.08
CDH1P12830 AL109918.3-201ENST00000603072 338 ntBASIC2.04□□□□□ -2.08
CDH1P12830 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.04□□□□□ -2.08
CDH1P12830 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
CDH1P12830 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.04□□□□□ -2.08
CDH1P12830 SNORD113-8-201ENST00000363497 74 ntBASIC2.03□□□□□ -2.08
CDH1P12830 Y_RNA.193-201ENST00000363979 102 ntBASIC2.03□□□□□ -2.08
CDH1P12830 Y_RNA.376-201ENST00000365638 108 ntBASIC2.03□□□□□ -2.08
CDH1P12830 Y_RNA.396-201ENST00000383949 103 ntBASIC2.03□□□□□ -2.08
CDH1P12830 Y_RNA.452-201ENST00000384202 108 ntBASIC2.03□□□□□ -2.08
CDH1P12830 MT-TW-201ENST00000387382 68 ntBASIC2.03□□□□□ -2.08
CDH1P12830 MIR1302-3-201ENST00000408128 138 ntBASIC2.03□□□□□ -2.08
CDH1P12830 RNU5A-5P-201ENST00000411054 116 ntBASIC2.03□□□□□ -2.08
CDH1P12830 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.03□□□□□ -2.08
CDH1P12830 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CDH1P12830 RPS27P21-201ENST00000486977 252 ntBASIC2.03□□□□□ -2.08
CDH1P12830 AC093259.1-201ENST00000509755 300 ntBASIC2.03□□□□□ -2.08
CDH1P12830 RNU6-991P-201ENST00000516168 107 ntBASIC2.03□□□□□ -2.08
CDH1P12830 RNU6-966P-201ENST00000516479 104 ntBASIC2.03□□□□□ -2.08
CDH1P12830 RNU6-107P-201ENST00000516643 102 ntBASIC2.03□□□□□ -2.08
CDH1P12830 NDUFA5P6-201ENST00000542110 379 ntBASIC2.03□□□□□ -2.08
CDH1P12830 MIR4513-201ENST00000581077 86 ntBASIC2.03□□□□□ -2.08
CDH1P12830 MIR3149-201ENST00000584629 83 ntBASIC2.03□□□□□ -2.08
CDH1P12830 AC012640.5-201ENST00000623897 319 ntBASIC2.03□□□□□ -2.08
CDH1P12830 AC091932.3-201ENST00000624223 323 ntBASIC2.03□□□□□ -2.08
CDH1P12830 MIR3674-201ENST00000636576 68 ntBASIC2.03□□□□□ -2.08
CDH1P12830 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.02□□□□□ -2.09
CDH1P12830 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDH1P12830 AC131280.1-202ENST00000624067 4211 ntBASIC2.02□□□□□ -2.09
CDH1P12830 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDH1P12830 Y_RNA.101-201ENST00000363154 102 ntBASIC2.02□□□□□ -2.09
CDH1P12830 RNU6-454P-201ENST00000364292 107 ntBASIC2.02□□□□□ -2.09
CDH1P12830 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
CDH1P12830 RNU6-1175P-201ENST00000365200 107 ntBASIC2.02□□□□□ -2.09
CDH1P12830 Y_RNA.332-201ENST00000365271 113 ntBASIC2.02□□□□□ -2.09
CDH1P12830 RNU6-975P-201ENST00000384296 105 ntBASIC2.02□□□□□ -2.09
CDH1P12830 SNORA67.3-201ENST00000384366 140 ntBASIC2.02□□□□□ -2.09
CDH1P12830 RNU6-102P-201ENST00000384485 104 ntBASIC2.02□□□□□ -2.09
CDH1P12830 SNORA64-201ENST00000384674 134 ntBASIC2.02□□□□□ -2.09
CDH1P12830 Y_RNA.581-201ENST00000391017 97 ntBASIC2.02□□□□□ -2.09
CDH1P12830 AL023284.1-201ENST00000403956 276 ntBASIC2.02□□□□□ -2.09
CDH1P12830 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.02□□□□□ -2.09
CDH1P12830 RNU4-30P-201ENST00000410245 143 ntBASIC2.02□□□□□ -2.09
CDH1P12830 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.02□□□□□ -2.09
CDH1P12830 AC009238.1-201ENST00000442165 424 ntBASIC2.02□□□□□ -2.09
CDH1P12830 AC009237.6-201ENST00000446969 424 ntBASIC2.02□□□□□ -2.09
CDH1P12830 HSPE1P25-201ENST00000455484 251 ntBASIC2.02□□□□□ -2.09
CDH1P12830 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
CDH1P12830 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.02□□□□□ -2.09
CDH1P12830 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.02□□□□□ -2.09
CDH1P12830 MIR4753-201ENST00000585119 83 ntBASIC2.02□□□□□ -2.09
CDH1P12830 AC004467.1-201ENST00000615678 330 ntBASIC2.02□□□□□ -2.09
CDH1P12830 U4.1-201ENST00000620349 87 ntBASIC2.02□□□□□ -2.09
CDH1P12830 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.02□□□□□ -2.09
CDH1P12830 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CDH1P12830 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
CDH1P12830 MIR340-201ENST00000362125 95 ntBASIC2.01□□□□□ -2.09
CDH1P12830 Y_RNA.84-201ENST00000363011 104 ntBASIC2.01□□□□□ -2.09
CDH1P12830 Y_RNA.286-201ENST00000364813 102 ntBASIC2.01□□□□□ -2.09
CDH1P12830 RNU6-438P-201ENST00000365561 103 ntBASIC2.01□□□□□ -2.09
CDH1P12830 RNU6-1310P-201ENST00000384153 107 ntBASIC2.01□□□□□ -2.09
CDH1P12830 Y_RNA.461-201ENST00000384263 103 ntBASIC2.01□□□□□ -2.09
CDH1P12830 Y_RNA.483-201ENST00000384380 101 ntBASIC2.01□□□□□ -2.09
CDH1P12830 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms