Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2□□□□□ -2.09
ACTN1P12814 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
ACTN1P12814 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
ACTN1P12814 RPS29P11-201ENST00000496507 171 ntBASIC2□□□□□ -2.09
ACTN1P12814 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2□□□□□ -2.09
ACTN1P12814 RNVU1-2-201ENST00000516326 135 ntBASIC2□□□□□ -2.09
ACTN1P12814 RNU6-948P-201ENST00000516374 107 ntBASIC2□□□□□ -2.09
ACTN1P12814 Y_RNA.683-201ENST00000516508 93 ntBASIC2□□□□□ -2.09
ACTN1P12814 AK6P2-201ENST00000549020 471 ntBASIC2□□□□□ -2.09
ACTN1P12814 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2□□□□□ -2.09
ACTN1P12814 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2□□□□□ -2.09
ACTN1P12814 AL133255.1-201ENST00000606374 441 ntBASIC2□□□□□ -2.09
ACTN1P12814 MIR8081-201ENST00000611533 95 ntBASIC2□□□□□ -2.09
ACTN1P12814 MIR8070-201ENST00000616510 88 ntBASIC2□□□□□ -2.09
ACTN1P12814 AC087588.2-201ENST00000617667 426 ntBASIC2□□□□□ -2.09
ACTN1P12814 AC008873.1-201ENST00000625051 138 ntBASIC2□□□□□ -2.09
ACTN1P12814 AC009487.4-201ENST00000624969 3585 ntBASIC2□□□□□ -2.09
ACTN1P12814 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
ACTN1P12814 RNU6-490P-201ENST00000362985 107 ntBASIC1.99□□□□□ -2.09
ACTN1P12814 Y_RNA.118-201ENST00000363300 101 ntBASIC1.99□□□□□ -2.09
ACTN1P12814 RNU5F-3P-201ENST00000363767 117 ntBASIC1.99□□□□□ -2.09
ACTN1P12814 SNORA16.1-201ENST00000364597 132 ntBASIC1.99□□□□□ -2.09
ACTN1P12814 AL357134.1-201ENST00000445848 426 ntBASIC1.99□□□□□ -2.09
ACTN1P12814 RNU1-131P-201ENST00000458943 161 ntBASIC1.99□□□□□ -2.09
ACTN1P12814 HMGB3P17-201ENST00000504195 649 ntBASIC1.99□□□□□ -2.09
ACTN1P12814 SUMO2P18-201ENST00000518873 252 ntBASIC1.99□□□□□ -2.09
ACTN1P12814 AL357075.2-201ENST00000614906 189 ntBASIC1.99□□□□□ -2.09
ACTN1P12814 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.99□□□□□ -2.09
ACTN1P12814 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ACTN1P12814 Y_RNA.463-201ENST00000384271 102 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 MIR329-1-201ENST00000385028 80 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ACTN1P12814 AL158823.1-201ENST00000418441 478 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 AF228730.4-201ENST00000421457 183 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 AC060773.1-201ENST00000421698 310 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.98□□□□□ -2.09
ACTN1P12814 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.98□□□□□ -2.09
ACTN1P12814 UQCRBP2-201ENST00000447827 297 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.98□□□□□ -2.09
ACTN1P12814 RNU7-152P-201ENST00000458982 64 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 AC027575.1-201ENST00000481064 460 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.98□□□□□ -2.09
ACTN1P12814 AC067942.3-201ENST00000512025 362 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 RNU6-856P-201ENST00000516959 98 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 RNU7-4P-201ENST00000516961 62 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 AC091144.1-201ENST00000519573 138 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 AC104985.2-201ENST00000620598 500 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 AC022513.1-201ENST00000624512 117 ntBASIC1.98□□□□□ -2.09
ACTN1P12814 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.98□□□□□ -2.09
ACTN1P12814 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ACTN1P12814 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ACTN1P12814 Y_RNA.315-201ENST00000365117 102 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 RNU6-926P-201ENST00000384075 107 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 RNU6-318P-201ENST00000384283 103 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 Y_RNA.509-201ENST00000384506 99 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 Y_RNA.592-201ENST00000410274 109 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 UBE2V1P7-201ENST00000446395 340 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.97□□□□□ -2.09
ACTN1P12814 ATP5J2P3-201ENST00000451550 258 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
ACTN1P12814 DNAJC19P9-201ENST00000555084 351 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 MIR4419B-201ENST00000577260 68 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 MIR5094-201ENST00000578766 85 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 C8orf59P2-201ENST00000603441 271 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 snoZ196.1-201ENST00000625269 89 ntBASIC1.97□□□□□ -2.09
ACTN1P12814 RNU6-862P-201ENST00000362804 105 ntBASIC1.96□□□□□ -2.1
ACTN1P12814 Y_RNA.428-201ENST00000384078 102 ntBASIC1.96□□□□□ -2.1
ACTN1P12814 RNU6-1235P-201ENST00000384559 107 ntBASIC1.96□□□□□ -2.1
ACTN1P12814 MIR628-201ENST00000385229 95 ntBASIC1.96□□□□□ -2.1
ACTN1P12814 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
ACTN1P12814 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.96□□□□□ -2.1
ACTN1P12814 RNU6-498P-201ENST00000459468 107 ntBASIC1.96□□□□□ -2.1
ACTN1P12814 AC011406.1-201ENST00000512440 370 ntBASIC1.96□□□□□ -2.1
ACTN1P12814 AC144568.1-201ENST00000520139 137 ntBASIC1.96□□□□□ -2.1
ACTN1P12814 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.96□□□□□ -2.1
ACTN1P12814 MIR4255-201ENST00000579351 72 ntBASIC1.96□□□□□ -2.1
ACTN1P12814 AL512598.1-201ENST00000610158 273 ntBASIC1.96□□□□□ -2.1
ACTN1P12814 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.96□□□□□ -2.1
ACTN1P12814 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.96□□□□□ -2.1
ACTN1P12814 RNU6-1115P-201ENST00000362490 106 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 RNU6-1301P-201ENST00000362724 104 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 U3.8-201ENST00000363675 217 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 Y_RNA.813-201ENST00000364639 102 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 RNU4-42P-201ENST00000364738 142 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 MTND4P28-201ENST00000426217 387 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 HMGN2P34-201ENST00000437647 269 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 AC099799.1-201ENST00000439809 192 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 RNU2-34P-201ENST00000516534 121 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 SNORD116.3-201ENST00000517176 78 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.95□□□□□ -2.1
ACTN1P12814 AC005786.1-201ENST00000588553 154 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.95□□□□□ -2.1
ACTN1P12814 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
ACTN1P12814 MIR369-201ENST00000362155 70 ntBASIC1.94□□□□□ -2.1
ACTN1P12814 RNU6-1145P-201ENST00000384246 107 ntBASIC1.94□□□□□ -2.1
ACTN1P12814 SNORD12B-201ENST00000410433 91 ntBASIC1.94□□□□□ -2.1
ACTN1P12814 MTND2P29-201ENST00000438595 412 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 442.4 ms