Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.02□□□□□ -2.41
FREM3P0C091 RNU6-758P-201ENST00000516292 89 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AC141557.1-201ENST00000540982 400 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AC087588.2-201ENST00000617667 426 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AC137590.2-201ENST00000619709 240 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AC009878.1-201ENST00000621819 340 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 MIR411-201ENST00000362239 96 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 SNORD68-201ENST00000363214 84 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 RNY4P3-201ENST00000365254 95 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 SNORD115-7-201ENST00000365306 82 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 RNU6-125P-201ENST00000384505 107 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 MIR454-201ENST00000390180 115 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.02□□□□□ -2.41
FREM3P0C091 RNU6-757P-201ENST00000410334 100 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AC008134.1-201ENST00000420943 193 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 MTND3P9-201ENST00000429526 346 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.02□□□□□ -2.41
FREM3P0C091 AC016550.1-201ENST00000505348 785 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AC005178.1-201ENST00000508392 440 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AC025647.1-201ENST00000517879 253 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AC027419.1-201ENST00000522976 328 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AC131055.1-201ENST00000584626 316 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 AC006435.5-201ENST00000624486 112 ntBASIC-0.02□□□□□ -2.41
FREM3P0C091 RNU6-517P-201ENST00000384362 110 ntBASIC-0.03□□□□□ -2.41
FREM3P0C091 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.03□□□□□ -2.41
FREM3P0C091 RNU6-700P-201ENST00000391043 107 ntBASIC-0.03□□□□□ -2.41
FREM3P0C091 SNORD71-201ENST00000411292 86 ntBASIC-0.03□□□□□ -2.41
FREM3P0C091 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.03□□□□□ -2.41
FREM3P0C091 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.03□□□□□ -2.41
FREM3P0C091 AL392103.1-201ENST00000447000 198 ntBASIC-0.03□□□□□ -2.41
FREM3P0C091 MTND4P18-201ENST00000447010 465 ntBASIC-0.03□□□□□ -2.41
FREM3P0C091 RNU6-977P-201ENST00000516411 103 ntBASIC-0.03□□□□□ -2.41
FREM3P0C091 AP002004.2-201ENST00000531656 154 ntBASIC-0.03□□□□□ -2.41
FREM3P0C091 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.03□□□□□ -2.41
FREM3P0C091 MTND5P17-201ENST00000418405 1603 ntBASIC-0.03□□□□□ -2.41
FREM3P0C091 MIR320B2-201ENST00000408479 138 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
FREM3P0C091 RPL23AP54-201ENST00000495129 419 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 RPL39P5-202ENST00000512505 151 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 SNORD27.1-201ENST00000516319 72 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 AC104576.1-201ENST00000524225 88 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 AK6P2-201ENST00000549020 471 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 RNU6-227P-201ENST00000362865 103 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 RNU6-833P-201ENST00000363486 107 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 RNU4-9P-201ENST00000364951 139 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 RNU6-364P-201ENST00000384387 107 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 SNORD70.1-201ENST00000391007 85 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 RNU6-613P-201ENST00000410412 108 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.04□□□□□ -2.42
FREM3P0C091 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.04□□□□□ -2.42
FREM3P0C091 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.04□□□□□ -2.42
FREM3P0C091 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.04□□□□□ -2.42
FREM3P0C091 MIR4431-201ENST00000579990 94 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 AC234772.3-201ENST00000602277 528 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 AC104260.1-201ENST00000616660 539 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 AC104010.1-201ENST00000616889 150 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 AL607023.1-201ENST00000620045 248 ntBASIC-0.04□□□□□ -2.42
FREM3P0C091 MTND4P9-201ENST00000507819 1346 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 RNU6-369P-201ENST00000362515 102 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 SNORA1B-201ENST00000362535 133 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 RNA5SP368-201ENST00000364298 116 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 RNU6-533P-201ENST00000384144 107 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 MIR452-201ENST00000385020 85 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 snoU13.6-201ENST00000458785 104 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 AC074133.1-201ENST00000515696 183 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.05□□□□□ -2.42
FREM3P0C091 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.05□□□□□ -2.42
FREM3P0C091 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.05□□□□□ -2.42
FREM3P0C091 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.05□□□□□ -2.42
FREM3P0C091 AL158211.1-201ENST00000566763 763 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 MIR4804-201ENST00000581683 73 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 Pinc.1-201ENST00000616452 154 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 AL078596.1-201ENST00000624856 447 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 SEPT14P19-203ENST00000633205 211 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 RNU6-501P-201ENST00000364072 100 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.05□□□□□ -2.42
FREM3P0C091 SNORA20.2-201ENST00000383922 131 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.05□□□□□ -2.42
FREM3P0C091 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 IGLVI-20-201ENST00000519296 130 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 RNU6-85P-201ENST00000605989 107 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 uc_338.16-201ENST00000621804 95 ntBASIC-0.05□□□□□ -2.42
FREM3P0C091 RNU6-727P-201ENST00000363592 107 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms