Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AL449363.1-201ENST00000617815 186 ntBASIC2.61□□□□□ -1.99
RHOP08100 AC090517.3-201ENST00000625170 141 ntBASIC2.61□□□□□ -1.99
RHOP08100 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RHOP08100 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RHOP08100 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.61□□□□□ -1.99
RHOP08100 AL161431.1-201ENST00000618966 4205 ntBASIC2.61□□□□□ -1.99
RHOP08100 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RHOP08100 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.6□□□□□ -1.99
RHOP08100 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
RHOP08100 RNA5SP432-201ENST00000362480 116 ntBASIC2.6□□□□□ -1.99
RHOP08100 Y_RNA.122-201ENST00000363331 96 ntBASIC2.6□□□□□ -1.99
RHOP08100 Y_RNA.217-201ENST00000364214 105 ntBASIC2.6□□□□□ -1.99
RHOP08100 Y_RNA.297-201ENST00000364950 91 ntBASIC2.6□□□□□ -1.99
RHOP08100 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.6□□□□□ -1.99
RHOP08100 Y_RNA.641-201ENST00000459414 105 ntBASIC2.6□□□□□ -1.99
RHOP08100 RNU6-182P-201ENST00000516970 105 ntBASIC2.6□□□□□ -1.99
RHOP08100 RNU1-117P-201ENST00000517041 158 ntBASIC2.6□□□□□ -1.99
RHOP08100 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.6□□□□□ -1.99
RHOP08100 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.6□□□□□ -1.99
RHOP08100 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.6□□□□□ -1.99
RHOP08100 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.6□□□□□ -1.99
RHOP08100 AC135776.4-201ENST00000624300 1904 ntBASIC2.6□□□□□ -1.99
RHOP08100 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RHOP08100 Y_RNA.361-201ENST00000365515 120 ntBASIC2.59□□□□□ -1.99
RHOP08100 RNU6-209P-201ENST00000384118 107 ntBASIC2.59□□□□□ -1.99
RHOP08100 RNU4-70P-201ENST00000384579 139 ntBASIC2.59□□□□□ -1.99
RHOP08100 RNA5SP210-201ENST00000391034 120 ntBASIC2.59□□□□□ -1.99
RHOP08100 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.59□□□□□ -1.99
RHOP08100 MIR1294-201ENST00000408503 142 ntBASIC2.59□□□□□ -1.99
RHOP08100 RNU2-61P-201ENST00000411069 191 ntBASIC2.59□□□□□ -1.99
RHOP08100 RN7SKP192-201ENST00000411291 327 ntBASIC2.59□□□□□ -1.99
RHOP08100 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.59□□□□□ -1.99
RHOP08100 HMGN2P9-201ENST00000476875 229 ntBASIC2.59□□□□□ -1.99
RHOP08100 AC234781.5-201ENST00000508429 271 ntBASIC2.59□□□□□ -1.99
RHOP08100 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.59□□□□□ -1.99
RHOP08100 RNU6-191P-201ENST00000516295 94 ntBASIC2.59□□□□□ -1.99
RHOP08100 RNU6-107P-201ENST00000516643 102 ntBASIC2.59□□□□□ -1.99
RHOP08100 RNU6-1098P-201ENST00000516772 96 ntBASIC2.59□□□□□ -1.99
RHOP08100 RNU6-586P-201ENST00000517265 104 ntBASIC2.59□□□□□ -1.99
RHOP08100 RPL21P9-201ENST00000556149 474 ntBASIC2.59□□□□□ -1.99
RHOP08100 AC006380.1-201ENST00000603598 186 ntBASIC2.59□□□□□ -1.99
RHOP08100 AL356280.1-201ENST00000603614 379 ntBASIC2.59□□□□□ -1.99
RHOP08100 AC011921.3-201ENST00000605540 361 ntBASIC2.59□□□□□ -1.99
RHOP08100 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.59□□□□□ -1.99
RHOP08100 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
RHOP08100 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
RHOP08100 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.59□□□□□ -2
RHOP08100 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
RHOP08100 MIR411-201ENST00000362239 96 ntBASIC2.58□□□□□ -2
RHOP08100 Y_RNA.83-201ENST00000363005 113 ntBASIC2.58□□□□□ -2
RHOP08100 RNU4-80P-201ENST00000363200 141 ntBASIC2.58□□□□□ -2
RHOP08100 RNU6-944P-201ENST00000364023 107 ntBASIC2.58□□□□□ -2
RHOP08100 SNORD115-30-201ENST00000364117 82 ntBASIC2.58□□□□□ -2
RHOP08100 RNY4P28-201ENST00000365281 93 ntBASIC2.58□□□□□ -2
RHOP08100 Y_RNA.555-201ENST00000384673 110 ntBASIC2.58□□□□□ -2
RHOP08100 MIR300-201ENST00000401138 83 ntBASIC2.58□□□□□ -2
RHOP08100 RNA5SP425-201ENST00000410336 112 ntBASIC2.58□□□□□ -2
RHOP08100 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.58□□□□□ -2
RHOP08100 AC104389.3-201ENST00000445629 235 ntBASIC2.58□□□□□ -2
RHOP08100 AL138752.1-201ENST00000452964 351 ntBASIC2.58□□□□□ -2
RHOP08100 snoU13.26-201ENST00000459452 105 ntBASIC2.58□□□□□ -2
RHOP08100 RPS29P21-201ENST00000496272 170 ntBASIC2.58□□□□□ -2
RHOP08100 RNU5F-4P-201ENST00000516581 114 ntBASIC2.58□□□□□ -2
RHOP08100 CBX3P4-201ENST00000538909 354 ntBASIC2.58□□□□□ -2
RHOP08100 AC090616.3-201ENST00000582184 217 ntBASIC2.58□□□□□ -2
RHOP08100 AL512605.2-201ENST00000592972 256 ntBASIC2.58□□□□□ -2
RHOP08100 AC023043.3-201ENST00000593113 385 ntBASIC2.58□□□□□ -2
RHOP08100 DEFB117-201ENST00000602356 141 ntBASIC2.58□□□□□ -2
RHOP08100 AC069294.1-201ENST00000608397 350 ntBASIC2.58□□□□□ -2
RHOP08100 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.58□□□□□ -2
RHOP08100 FTX_2.1-201ENST00000618816 94 ntBASIC2.58□□□□□ -2
RHOP08100 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.58□□□□□ -2
RHOP08100 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.58□□□□□ -2
RHOP08100 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
RHOP08100 AC080128.1-201ENST00000474389 1917 ntBASIC2.58□□□□□ -2
RHOP08100 Y_RNA.199-201ENST00000364014 102 ntBASIC2.57□□□□□ -2
RHOP08100 Y_RNA.243-201ENST00000364481 109 ntBASIC2.57□□□□□ -2
RHOP08100 Y_RNA.292-201ENST00000364904 97 ntBASIC2.57□□□□□ -2
RHOP08100 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
RHOP08100 RNU6-1289P-201ENST00000384431 106 ntBASIC2.57□□□□□ -2
RHOP08100 MIR95-201ENST00000385072 81 ntBASIC2.57□□□□□ -2
RHOP08100 MIR181B1-201ENST00000385240 110 ntBASIC2.57□□□□□ -2
RHOP08100 RNU6-1248P-201ENST00000391096 64 ntBASIC2.57□□□□□ -2
RHOP08100 U3.40-201ENST00000408706 208 ntBASIC2.57□□□□□ -2
RHOP08100 Y_RNA.590-201ENST00000410140 107 ntBASIC2.57□□□□□ -2
RHOP08100 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.57□□□□□ -2
RHOP08100 AL135786.1-201ENST00000415892 214 ntBASIC2.57□□□□□ -2
RHOP08100 MTND5P15-201ENST00000434246 349 ntBASIC2.57□□□□□ -2
RHOP08100 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.57□□□□□ -2
RHOP08100 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.57□□□□□ -2
RHOP08100 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.57□□□□□ -2
RHOP08100 RNU6-436P-201ENST00000516171 114 ntBASIC2.57□□□□□ -2
RHOP08100 MIR3684-201ENST00000579779 74 ntBASIC2.57□□□□□ -2
RHOP08100 MIR3199-1-201ENST00000582434 88 ntBASIC2.57□□□□□ -2
RHOP08100 AC005828.6-201ENST00000606610 232 ntBASIC2.57□□□□□ -2
RHOP08100 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
RHOP08100 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.57□□□□□ -2
RHOP08100 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.56□□□□□ -2
RHOP08100 RNU6-234P-201ENST00000365229 104 ntBASIC2.56□□□□□ -2
RHOP08100 MIR548B-201ENST00000385247 97 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms