Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 AL445984.1-201ENST00000637834 659 ntBASIC-0.35□□□□□ -2.47
TFF1P04155 MTND5P17-201ENST00000418405 1603 ntBASIC-0.35□□□□□ -2.47
TFF1P04155 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.36□□□□□ -2.47
TFF1P04155 MIR377-201ENST00000362145 69 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 SNORD114-5-201ENST00000362928 70 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 RNA5SP275-201ENST00000363936 118 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 SNORA75.6-201ENST00000391318 127 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 MIR891A-201ENST00000401237 79 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 MIR1185-2-201ENST00000408687 86 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 RN7SKP142-201ENST00000411236 328 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 RPS29P8-201ENST00000445109 171 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 AL031274.1-201ENST00000450334 232 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.36□□□□□ -2.47
TFF1P04155 RNU7-41P-201ENST00000515917 61 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 RNU7-43P-201ENST00000516554 64 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 RNU1-117P-201ENST00000517041 158 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 SNORA25.17-201ENST00000517184 124 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 AP002004.2-201ENST00000531656 154 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.36□□□□□ -2.47
TFF1P04155 AC013244.3-201ENST00000605614 388 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.36□□□□□ -2.47
TFF1P04155 AL031667.3-201ENST00000620124 655 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 AL008636.1-201ENST00000625038 1018 ntBASIC-0.36□□□□□ -2.47
TFF1P04155 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.36□□□□□ -2.47
TFF1P04155 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
TFF1P04155 RNU6-179P-201ENST00000363350 107 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 SNORD95.1-201ENST00000364099 68 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 SNORD115-7-201ENST00000365306 82 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 MIR452-201ENST00000385020 85 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 MIR15B-201ENST00000385045 98 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 MIR520G-201ENST00000385064 90 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 MIR520H-201ENST00000385126 88 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 MTCO2P23-201ENST00000425216 680 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.37□□□□□ -2.47
TFF1P04155 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.37□□□□□ -2.47
TFF1P04155 MTND2P38-201ENST00000522536 667 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.37□□□□□ -2.47
TFF1P04155 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
TFF1P04155 MIR3941-201ENST00000582572 103 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 AP000907.4-201ENST00000604143 237 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 AC010999.1-201ENST00000611856 324 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 AC022418.1-201ENST00000624118 445 ntBASIC-0.37□□□□□ -2.47
TFF1P04155 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 SNORA25.3-201ENST00000363205 127 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 RNU6-674P-201ENST00000363831 107 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 SNORD83.1-201ENST00000411362 77 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 AC096531.1-201ENST00000419107 107 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 MRPS10P1-201ENST00000448483 130 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 PCNPP5-201ENST00000452246 481 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 AC103996.1-201ENST00000555468 102 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 SNORA25.18-201ENST00000607153 114 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 AC138749.5-201ENST00000611461 208 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 AC068792.1-201ENST00000621354 417 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 AC005592.1-201ENST00000566527 1640 ntBASIC-0.38□□□□□ -2.47
TFF1P04155 SNORD49B-201ENST00000365172 72 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 RNU6-715P-201ENST00000365204 103 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 RNU6-827P-201ENST00000365553 106 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 RNU6-30P-201ENST00000384561 107 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 MIR224-201ENST00000384889 81 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 MIR145-201ENST00000384967 88 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 RNU6-269P-201ENST00000391077 97 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 MIR892B-201ENST00000401279 77 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 MTCO3P19-201ENST00000415864 321 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.39□□□□□ -2.47
TFF1P04155 RNU7-182P-201ENST00000459009 62 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.39□□□□□ -2.47
TFF1P04155 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.39□□□□□ -2.47
TFF1P04155 MIR8076-201ENST00000611401 83 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 AC126544.2-201ENST00000625174 749 ntBASIC-0.39□□□□□ -2.47
TFF1P04155 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
TFF1P04155 RNU6-137P-201ENST00000363680 108 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 RNU6-245P-201ENST00000384020 107 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 MIR520C-201ENST00000385005 87 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 MT-TN-201ENST00000387400 73 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 AL355143.1-201ENST00000407101 841 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 MTND3P20-201ENST00000407663 186 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 MIR320B2-201ENST00000408479 138 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 MIR548H2-201ENST00000408874 88 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.4□□□□□ -2.47
TFF1P04155 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.4□□□□□ -2.47
TFF1P04155 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.4□□□□□ -2.47
TFF1P04155 MTCO2P3-201ENST00000442543 421 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.4□□□□□ -2.47
TFF1P04155 SNORA14.1-201ENST00000516113 141 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 RNU2-56P-201ENST00000516826 190 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 AC105185.1-201ENST00000518705 535 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 AK6P2-201ENST00000549020 471 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 FRG2DP-202ENST00000566967 323 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 MIR4438-201ENST00000585271 93 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 AL355073.2-201ENST00000612106 557 ntBASIC-0.4□□□□□ -2.47
TFF1P04155 AC010608.3-201ENST00000625048 527 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms