Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 AC009237.7-201ENST00000447357 229 ntBASIC1.36□□□□□ -2.19
MMP1P03956 RNU6-1213P-201ENST00000517075 94 ntBASIC1.36□□□□□ -2.19
MMP1P03956 AL137100.2-201ENST00000555786 315 ntBASIC1.36□□□□□ -2.19
MMP1P03956 UBL5P4-201ENST00000562584 236 ntBASIC1.36□□□□□ -2.19
MMP1P03956 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.36□□□□□ -2.19
MMP1P03956 MIR5006-201ENST00000583027 110 ntBASIC1.36□□□□□ -2.19
MMP1P03956 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.36□□□□□ -2.19
MMP1P03956 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.36□□□□□ -2.19
MMP1P03956 AC137590.2-201ENST00000619709 240 ntBASIC1.36□□□□□ -2.19
MMP1P03956 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.36□□□□□ -2.19
MMP1P03956 AC245060.5-201ENST00000610778 3293 ntBASIC1.36□□□□□ -2.19
MMP1P03956 AL159152.1-201ENST00000635019 2587 ntBASIC1.36□□□□□ -2.19
MMP1P03956 RNU6-874P-201ENST00000362390 105 ntBASIC1.35□□□□□ -2.19
MMP1P03956 Y_RNA.319-201ENST00000365138 92 ntBASIC1.35□□□□□ -2.19
MMP1P03956 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.35□□□□□ -2.19
MMP1P03956 RNU6-331P-201ENST00000384724 107 ntBASIC1.35□□□□□ -2.19
MMP1P03956 MIR1283-1-201ENST00000408494 87 ntBASIC1.35□□□□□ -2.19
MMP1P03956 AC099677.2-201ENST00000436385 175 ntBASIC1.35□□□□□ -2.19
MMP1P03956 ATP5J2P3-201ENST00000451550 258 ntBASIC1.35□□□□□ -2.19
MMP1P03956 snoU13.9-201ENST00000458927 103 ntBASIC1.35□□□□□ -2.19
MMP1P03956 Y_RNA.708-201ENST00000516950 96 ntBASIC1.35□□□□□ -2.19
MMP1P03956 AL590705.4-201ENST00000532209 134 ntBASIC1.35□□□□□ -2.19
MMP1P03956 RRN3P3-201ENST00000549207 578 ntBASIC1.35□□□□□ -2.19
MMP1P03956 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.35□□□□□ -2.19
MMP1P03956 AC005668.1-201ENST00000571142 476 ntBASIC1.35□□□□□ -2.19
MMP1P03956 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.35□□□□□ -2.19
MMP1P03956 MIR4801-201ENST00000582704 82 ntBASIC1.35□□□□□ -2.19
MMP1P03956 FAM106DP-201ENST00000586416 501 ntBASIC1.35□□□□□ -2.19
MMP1P03956 AC069114.2-201ENST00000604699 304 ntBASIC1.35□□□□□ -2.19
MMP1P03956 AC083806.3-201ENST00000614016 455 ntBASIC1.35□□□□□ -2.19
MMP1P03956 AC091812.1-201ENST00000432235 1948 ntBASIC1.34□□□□□ -2.19
MMP1P03956 MTND4P12-201ENST00000498999 1377 ntBASIC1.34□□□□□ -2.19
MMP1P03956 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
MMP1P03956 RNU6-414P-201ENST00000363705 104 ntBASIC1.34□□□□□ -2.19
MMP1P03956 SNORD114-27-201ENST00000363766 70 ntBASIC1.34□□□□□ -2.19
MMP1P03956 RNU6-873P-201ENST00000363833 107 ntBASIC1.34□□□□□ -2.19
MMP1P03956 RNU6-1080P-201ENST00000383982 107 ntBASIC1.34□□□□□ -2.19
MMP1P03956 RNU6-418P-201ENST00000384035 107 ntBASIC1.34□□□□□ -2.19
MMP1P03956 Y_RNA.490-201ENST00000384413 102 ntBASIC1.34□□□□□ -2.19
MMP1P03956 MIR520A-201ENST00000384862 85 ntBASIC1.34□□□□□ -2.19
MMP1P03956 MIR153-2-201ENST00000385225 87 ntBASIC1.34□□□□□ -2.19
MMP1P03956 RNU6-159P-201ENST00000391080 106 ntBASIC1.34□□□□□ -2.19
MMP1P03956 RPS29P1-201ENST00000465274 159 ntBASIC1.34□□□□□ -2.19
MMP1P03956 HMGN2P9-201ENST00000476875 229 ntBASIC1.34□□□□□ -2.19
MMP1P03956 HMGN1P13-201ENST00000505795 138 ntBASIC1.34□□□□□ -2.19
MMP1P03956 RNU6-277P-201ENST00000516272 106 ntBASIC1.34□□□□□ -2.19
MMP1P03956 AC105029.1-201ENST00000520250 669 ntBASIC1.34□□□□□ -2.19
MMP1P03956 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.34□□□□□ -2.19
MMP1P03956 AK6P2-201ENST00000549020 471 ntBASIC1.34□□□□□ -2.19
MMP1P03956 SNORA77B-201ENST00000578179 125 ntBASIC1.34□□□□□ -2.19
MMP1P03956 MIR4422-201ENST00000581938 83 ntBASIC1.34□□□□□ -2.19
MMP1P03956 AL355802.3-201ENST00000607571 545 ntBASIC1.34□□□□□ -2.19
MMP1P03956 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.34□□□□□ -2.19
MMP1P03956 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.34□□□□□ -2.19
MMP1P03956 MIR6515-201ENST00000619843 57 ntBASIC1.34□□□□□ -2.19
MMP1P03956 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MMP1P03956 Y_RNA.2-201ENST00000362330 96 ntBASIC1.33□□□□□ -2.2
MMP1P03956 Y_RNA.132-201ENST00000363421 102 ntBASIC1.33□□□□□ -2.2
MMP1P03956 SNORA72.1-201ENST00000363485 129 ntBASIC1.33□□□□□ -2.2
MMP1P03956 MIR10B-201ENST00000385011 110 ntBASIC1.33□□□□□ -2.2
MMP1P03956 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
MMP1P03956 SNORA75.4-201ENST00000391278 119 ntBASIC1.33□□□□□ -2.2
MMP1P03956 MIR1267-201ENST00000408723 78 ntBASIC1.33□□□□□ -2.2
MMP1P03956 MTND3P23-201ENST00000431980 347 ntBASIC1.33□□□□□ -2.2
MMP1P03956 AC016717.1-201ENST00000448918 286 ntBASIC1.33□□□□□ -2.2
MMP1P03956 AP000870.1-201ENST00000472927 406 ntBASIC1.33□□□□□ -2.2
MMP1P03956 RPL26P26-201ENST00000480251 434 ntBASIC1.33□□□□□ -2.2
MMP1P03956 AC091951.2-201ENST00000500762 203 ntBASIC1.33□□□□□ -2.2
MMP1P03956 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.33□□□□□ -2.2
MMP1P03956 SCARNA16.2-201ENST00000516520 172 ntBASIC1.33□□□□□ -2.2
MMP1P03956 RNA5SP54-201ENST00000516951 92 ntBASIC1.33□□□□□ -2.2
MMP1P03956 RNU6-856P-201ENST00000516959 98 ntBASIC1.33□□□□□ -2.2
MMP1P03956 AC005730.3-201ENST00000583067 366 ntBASIC1.33□□□□□ -2.2
MMP1P03956 SNRPGP20-201ENST00000604477 205 ntBASIC1.33□□□□□ -2.2
MMP1P03956 RBM11P1-201ENST00000604951 799 ntBASIC1.33□□□□□ -2.2
MMP1P03956 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.33□□□□□ -2.2
MMP1P03956 AC008873.1-201ENST00000625051 138 ntBASIC1.33□□□□□ -2.2
MMP1P03956 AC099654.5-201ENST00000636479 350 ntBASIC1.33□□□□□ -2.2
MMP1P03956 AL669831.3-213ENST00000636676 183 ntBASIC1.33□□□□□ -2.2
MMP1P03956 MIR6767-201ENST00000637302 66 ntBASIC1.33□□□□□ -2.2
MMP1P03956 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MMP1P03956 AC010615.1-201ENST00000594254 1764 ntBASIC1.32□□□□□ -2.2
MMP1P03956 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MMP1P03956 RNU6-222P-201ENST00000362438 107 ntBASIC1.32□□□□□ -2.2
MMP1P03956 RNU6-862P-201ENST00000362804 105 ntBASIC1.32□□□□□ -2.2
MMP1P03956 Y_RNA.67-201ENST00000362870 100 ntBASIC1.32□□□□□ -2.2
MMP1P03956 RNU6-137P-201ENST00000363680 108 ntBASIC1.32□□□□□ -2.2
MMP1P03956 RNU6-1188P-201ENST00000363795 107 ntBASIC1.32□□□□□ -2.2
MMP1P03956 RNU6-245P-201ENST00000384020 107 ntBASIC1.32□□□□□ -2.2
MMP1P03956 RNY3P14-201ENST00000384309 102 ntBASIC1.32□□□□□ -2.2
MMP1P03956 RNU6-360P-201ENST00000390944 104 ntBASIC1.32□□□□□ -2.2
MMP1P03956 MIR300-201ENST00000401138 83 ntBASIC1.32□□□□□ -2.2
MMP1P03956 RNU6-1304P-201ENST00000411374 106 ntBASIC1.32□□□□□ -2.2
MMP1P03956 EBAG9P1-201ENST00000418955 543 ntBASIC1.32□□□□□ -2.2
MMP1P03956 AL591704.2-201ENST00000421658 181 ntBASIC1.32□□□□□ -2.2
MMP1P03956 AL353997.1-201ENST00000432936 108 ntBASIC1.32□□□□□ -2.2
MMP1P03956 AC245047.4-201ENST00000433189 144 ntBASIC1.32□□□□□ -2.2
MMP1P03956 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.32□□□□□ -2.2
MMP1P03956 HSPE1P24-201ENST00000450782 238 ntBASIC1.32□□□□□ -2.2
MMP1P03956 AC067942.3-201ENST00000512025 362 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms