Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.89□□□□□ -2.27
HLA-DQB1P01920 RNU6-329P-201ENST00000459618 107 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 MTND5P5-201ENST00000503764 376 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 AP000889.1-201ENST00000530968 660 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 CBX3P8-201ENST00000532412 525 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 AL137100.2-201ENST00000555786 315 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 MIR4273-201ENST00000582824 84 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 MIR4295-201ENST00000585286 85 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 AC010999.1-201ENST00000611856 324 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 MIR6128-201ENST00000615528 109 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.89□□□□□ -2.27
HLA-DQB1P01920 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.89□□□□□ -2.27
HLA-DQB1P01920 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HLA-DQB1P01920 RNU6-222P-201ENST00000362438 107 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.48-201ENST00000362710 103 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 RNU6-1013P-201ENST00000384180 107 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.453-201ENST00000384223 109 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 RNU6-950P-201ENST00000384651 107 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.573-201ENST00000384763 105 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 RNU6-440P-201ENST00000390882 105 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 MRPL42P3-201ENST00000401492 326 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 SNORA11.2-201ENST00000408318 127 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 RNU6-1186P-201ENST00000410429 97 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DQB1P01920 SNX2P2-201ENST00000424553 323 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC245047.3-201ENST00000429428 127 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 OR2A41P-201ENST00000473586 105 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC011352.1-201ENST00000512300 793 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC026782.1-201ENST00000512952 449 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 RNU6-1114P-201ENST00000516022 107 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 RNU4-49P-201ENST00000516080 140 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 RNU6-165P-201ENST00000517170 99 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 SUMO2P16-201ENST00000519475 264 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 MIR3664-201ENST00000579074 99 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC018638.8-201ENST00000588755 281 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC125232.2-201ENST00000592457 143 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC018462.2-201ENST00000605375 395 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC040896.1-201ENST00000613819 479 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 AC068137.4-201ENST00000638485 296 ntBASIC0.88□□□□□ -2.27
HLA-DQB1P01920 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HLA-DQB1P01920 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 RNA5SP327-201ENST00000362494 101 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.106-201ENST00000363189 100 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 SNORA25.8-201ENST00000364831 128 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 RNA5SP259-201ENST00000365541 109 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 RNU6-1215P-201ENST00000384441 102 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 RNU6-1065P-201ENST00000384513 106 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 MIR329-1-201ENST00000385028 80 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 RN7SKP200-201ENST00000410564 320 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 ELOCP21-201ENST00000412558 336 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 USMG5P1-201ENST00000425964 177 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 EIF1P2-201ENST00000428233 350 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 MTND4LP16-201ENST00000440828 295 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 RPL39P38-201ENST00000467018 153 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.682-201ENST00000516457 100 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.683-201ENST00000516508 93 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 MIR4790-201ENST00000577799 79 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 MIR5695-201ENST00000579717 85 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 7SK.7-201ENST00000603504 247 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 AC005014.2-201ENST00000607795 599 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 AC006435.5-201ENST00000624486 112 ntBASIC0.87□□□□□ -2.27
HLA-DQB1P01920 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQB1P01920 RNU6-874P-201ENST00000362390 105 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.184-201ENST00000363884 108 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 RNU6-1145P-201ENST00000384246 107 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.473-201ENST00000384333 102 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
HLA-DQB1P01920 AL355796.1-201ENST00000406706 323 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 RPL37P10-201ENST00000412884 288 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.86□□□□□ -2.27
HLA-DQB1P01920 MRPS10P1-201ENST00000448483 130 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 AC092989.1-201ENST00000481235 277 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 AL133373.1-201ENST00000497098 94 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 RNU1-54P-201ENST00000517181 120 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 AC105029.1-201ENST00000520250 669 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 AC100812.1-201ENST00000607622 580 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 AL357075.2-201ENST00000614906 189 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 AC002553.4-201ENST00000616896 331 ntBASIC0.86□□□□□ -2.27
HLA-DQB1P01920 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.86□□□□□ -2.27
HLA-DQB1P01920 AC018630.2-201ENST00000534866 2403 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.339-201ENST00000365325 102 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 SNORA70.7-201ENST00000384159 133 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 MIR548K-201ENST00000408406 116 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 RNU6-1001P-201ENST00000411265 100 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms