Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 AC010999.1-201ENST00000611856 324 ntBASIC1.22□□□□□ -2.21
TGFAP01135 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
TGFAP01135 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TGFAP01135 RNA5SP327-201ENST00000362494 101 ntBASIC1.21□□□□□ -2.22
TGFAP01135 Y_RNA.41-201ENST00000362646 102 ntBASIC1.21□□□□□ -2.22
TGFAP01135 Y_RNA.157-201ENST00000363638 102 ntBASIC1.21□□□□□ -2.22
TGFAP01135 Y_RNA.184-201ENST00000363884 108 ntBASIC1.21□□□□□ -2.22
TGFAP01135 SNORA70.7-201ENST00000384159 133 ntBASIC1.21□□□□□ -2.22
TGFAP01135 MIR10B-201ENST00000385011 110 ntBASIC1.21□□□□□ -2.22
TGFAP01135 RNU6-440P-201ENST00000390882 105 ntBASIC1.21□□□□□ -2.22
TGFAP01135 AC005002.2-201ENST00000438228 269 ntBASIC1.21□□□□□ -2.22
TGFAP01135 SNRPGP13-201ENST00000442212 177 ntBASIC1.21□□□□□ -2.22
TGFAP01135 MTND4P18-201ENST00000447010 465 ntBASIC1.21□□□□□ -2.22
TGFAP01135 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.21□□□□□ -2.22
TGFAP01135 RNU6-1314P-201ENST00000517139 104 ntBASIC1.21□□□□□ -2.22
TGFAP01135 SUMO2P16-201ENST00000519475 264 ntBASIC1.21□□□□□ -2.22
TGFAP01135 UBL5P4-201ENST00000562584 236 ntBASIC1.21□□□□□ -2.22
TGFAP01135 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
TGFAP01135 AC090617.10-201ENST00000624308 134 ntBASIC1.21□□□□□ -2.22
TGFAP01135 AP000648.3-201ENST00000623539 4507 ntBASIC1.21□□□□□ -2.22
TGFAP01135 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TGFAP01135 RNU6-595P-201ENST00000363944 107 ntBASIC1.2□□□□□ -2.22
TGFAP01135 RNU4-13P-201ENST00000364019 141 ntBASIC1.2□□□□□ -2.22
TGFAP01135 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.2□□□□□ -2.22
TGFAP01135 MIR1276-201ENST00000408707 83 ntBASIC1.2□□□□□ -2.22
TGFAP01135 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.2□□□□□ -2.22
TGFAP01135 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.2□□□□□ -2.22
TGFAP01135 MTND4LP16-201ENST00000440828 295 ntBASIC1.2□□□□□ -2.22
TGFAP01135 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.2□□□□□ -2.22
TGFAP01135 AP000870.1-201ENST00000472927 406 ntBASIC1.2□□□□□ -2.22
TGFAP01135 AC093534.1-201ENST00000504977 132 ntBASIC1.2□□□□□ -2.22
TGFAP01135 RNU6-1114P-201ENST00000516022 107 ntBASIC1.2□□□□□ -2.22
TGFAP01135 RNU1-54P-201ENST00000517181 120 ntBASIC1.2□□□□□ -2.22
TGFAP01135 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.2□□□□□ -2.22
TGFAP01135 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.2□□□□□ -2.22
TGFAP01135 MIR3684-201ENST00000579779 74 ntBASIC1.2□□□□□ -2.22
TGFAP01135 MIR3942-201ENST00000585264 109 ntBASIC1.2□□□□□ -2.22
TGFAP01135 SNORA28-201ENST00000606769 126 ntBASIC1.2□□□□□ -2.22
TGFAP01135 MIR6078-201ENST00000611069 100 ntBASIC1.2□□□□□ -2.22
TGFAP01135 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
TGFAP01135 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.2□□□□□ -2.22
TGFAP01135 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TGFAP01135 RNU1-139P-201ENST00000391307 165 ntBASIC1.19□□□□□ -2.22
TGFAP01135 AL445305.1-201ENST00000432577 575 ntBASIC1.19□□□□□ -2.22
TGFAP01135 FO393415.2-201ENST00000480085 343 ntBASIC1.19□□□□□ -2.22
TGFAP01135 Y_RNA.683-201ENST00000516508 93 ntBASIC1.19□□□□□ -2.22
TGFAP01135 Y_RNA.706-201ENST00000516933 99 ntBASIC1.19□□□□□ -2.22
TGFAP01135 CYCSP23-201ENST00000519781 313 ntBASIC1.19□□□□□ -2.22
TGFAP01135 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.19□□□□□ -2.22
TGFAP01135 FRG2DP-202ENST00000566967 323 ntBASIC1.19□□□□□ -2.22
TGFAP01135 MIR4438-201ENST00000585271 93 ntBASIC1.19□□□□□ -2.22
TGFAP01135 AC100812.1-201ENST00000607622 580 ntBASIC1.19□□□□□ -2.22
TGFAP01135 AC073349.3-201ENST00000617616 186 ntBASIC1.19□□□□□ -2.22
TGFAP01135 RNU6-623P-201ENST00000363143 105 ntBASIC1.18□□□□□ -2.22
TGFAP01135 Y_RNA.191-201ENST00000363972 113 ntBASIC1.18□□□□□ -2.22
TGFAP01135 Y_RNA.533-201ENST00000384596 114 ntBASIC1.18□□□□□ -2.22
TGFAP01135 RNU6-306P-201ENST00000384617 107 ntBASIC1.18□□□□□ -2.22
TGFAP01135 AL139396.1-201ENST00000421137 167 ntBASIC1.18□□□□□ -2.22
TGFAP01135 DLGAP5P1-201ENST00000430307 464 ntBASIC1.18□□□□□ -2.22
TGFAP01135 MTATP6P26-201ENST00000445926 662 ntBASIC1.18□□□□□ -2.22
TGFAP01135 MRPS10P1-201ENST00000448483 130 ntBASIC1.18□□□□□ -2.22
TGFAP01135 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.18□□□□□ -2.22
TGFAP01135 AC010598.1-201ENST00000510378 103 ntBASIC1.18□□□□□ -2.22
TGFAP01135 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.18□□□□□ -2.22
TGFAP01135 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.18□□□□□ -2.22
TGFAP01135 U4.5-201ENST00000617137 123 ntBASIC1.18□□□□□ -2.22
TGFAP01135 AC018630.2-201ENST00000534866 2403 ntBASIC1.17□□□□□ -2.22
TGFAP01135 U8.1-201ENST00000362843 134 ntBASIC1.17□□□□□ -2.22
TGFAP01135 Y_RNA.796-201ENST00000364268 102 ntBASIC1.17□□□□□ -2.22
TGFAP01135 RNU4-75P-201ENST00000364621 146 ntBASIC1.17□□□□□ -2.22
TGFAP01135 Y_RNA.799-201ENST00000364992 102 ntBASIC1.17□□□□□ -2.22
TGFAP01135 Y_RNA.405-201ENST00000383979 100 ntBASIC1.17□□□□□ -2.22
TGFAP01135 Y_RNA.451-201ENST00000384200 100 ntBASIC1.17□□□□□ -2.22
TGFAP01135 Y_RNA.524-201ENST00000384564 100 ntBASIC1.17□□□□□ -2.22
TGFAP01135 Y_RNA.561-201ENST00000384694 100 ntBASIC1.17□□□□□ -2.22
TGFAP01135 MIR562-201ENST00000384894 95 ntBASIC1.17□□□□□ -2.22
TGFAP01135 USP9YP16-201ENST00000430287 407 ntBASIC1.17□□□□□ -2.22
TGFAP01135 MTND1P17-201ENST00000448961 204 ntBASIC1.17□□□□□ -2.22
TGFAP01135 USP9YP23-201ENST00000455085 407 ntBASIC1.17□□□□□ -2.22
TGFAP01135 RNU1-123P-201ENST00000458950 160 ntBASIC1.17□□□□□ -2.22
TGFAP01135 SNORD65B-201ENST00000459126 73 ntBASIC1.17□□□□□ -2.22
TGFAP01135 MTCYBP18-201ENST00000501056 747 ntBASIC1.17□□□□□ -2.22
TGFAP01135 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
TGFAP01135 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.17□□□□□ -2.22
TGFAP01135 EIF1P4-201ENST00000572664 335 ntBASIC1.17□□□□□ -2.22
TGFAP01135 MIR5695-201ENST00000579717 85 ntBASIC1.17□□□□□ -2.22
TGFAP01135 AL513534.2-201ENST00000603836 250 ntBASIC1.17□□□□□ -2.22
TGFAP01135 AC080013.6-201ENST00000606185 215 ntBASIC1.17□□□□□ -2.22
TGFAP01135 SNORD3E-202ENST00000627253 216 ntBASIC1.17□□□□□ -2.22
TGFAP01135 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
TGFAP01135 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
TGFAP01135 Y_RNA.89-201ENST00000363031 102 ntBASIC1.16□□□□□ -2.22
TGFAP01135 Y_RNA.450-201ENST00000384198 113 ntBASIC1.16□□□□□ -2.22
TGFAP01135 MIR660-201ENST00000385235 97 ntBASIC1.16□□□□□ -2.22
TGFAP01135 MTCO3P19-201ENST00000415864 321 ntBASIC1.16□□□□□ -2.22
TGFAP01135 MTND3P23-201ENST00000431980 347 ntBASIC1.16□□□□□ -2.22
TGFAP01135 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.16□□□□□ -2.22
TGFAP01135 snoU13.18-201ENST00000459483 104 ntBASIC1.16□□□□□ -2.22
TGFAP01135 RPS27P22-201ENST00000478056 241 ntBASIC1.16□□□□□ -2.22
TGFAP01135 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 300.9 ms