Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC010999.1-201ENST00000611856 324 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 SNORD38B-202ENST00000625943 69 ntBASIC-1.06□□□□□ -2.58
POLR1AO95602 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.07□□□□□ -2.58
POLR1AO95602 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.07□□□□□ -2.58
POLR1AO95602 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.07□□□□□ -2.58
POLR1AO95602 SNORA26-201ENST00000391286 122 ntBASIC-1.07□□□□□ -2.58
POLR1AO95602 MIR1302-7-201ENST00000408841 72 ntBASIC-1.07□□□□□ -2.58
POLR1AO95602 CALM2P4-201ENST00000430810 426 ntBASIC-1.07□□□□□ -2.58
POLR1AO95602 USP9YP28-201ENST00000435142 589 ntBASIC-1.07□□□□□ -2.58
POLR1AO95602 RNU6-158P-201ENST00000517104 100 ntBASIC-1.07□□□□□ -2.58
POLR1AO95602 RNU6-64P-201ENST00000517119 105 ntBASIC-1.07□□□□□ -2.58
POLR1AO95602 AC005520.5-201ENST00000613926 164 ntBASIC-1.07□□□□□ -2.58
POLR1AO95602 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
POLR1AO95602 MIR655-201ENST00000362159 97 ntBASIC-1.08□□□□□ -2.58
POLR1AO95602 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.08□□□□□ -2.58
POLR1AO95602 AC005002.2-201ENST00000438228 269 ntBASIC-1.08□□□□□ -2.58
POLR1AO95602 AC012433.1-201ENST00000588916 398 ntBASIC-1.08□□□□□ -2.58
POLR1AO95602 MIR549A-201ENST00000385268 96 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.09□□□□□ -2.58
POLR1AO95602 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.09□□□□□ -2.58
POLR1AO95602 AC104260.1-201ENST00000616660 539 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
POLR1AO95602 MIR1185-2-201ENST00000408687 86 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-1.09□□□□□ -2.58
POLR1AO95602 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.09□□□□□ -2.58
POLR1AO95602 MTND4P24-201ENST00000424002 397 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 MTND2P20-201ENST00000440805 661 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 AC016632.1-201ENST00000503994 196 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 RNU6-63P-201ENST00000516690 95 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 RNU6-448P-201ENST00000517052 107 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.09□□□□□ -2.58
POLR1AO95602 Z99497.2-201ENST00000603634 310 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 AL158042.1-201ENST00000605338 460 ntBASIC-1.09□□□□□ -2.58
POLR1AO95602 SNORD56.4-201ENST00000363883 71 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-447P-201ENST00000410293 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-355P-201ENST00000410427 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-791P-201ENST00000410467 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-705P-201ENST00000410601 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-860P-201ENST00000410860 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-785P-201ENST00000411324 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 AC079354.2-201ENST00000453523 154 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 RNU7-43P-201ENST00000516554 64 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 AC093023.1-201ENST00000547375 507 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.1□□□□□ -2.59
POLR1AO95602 AC009994.1-201ENST00000606889 253 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 AL442067.1-201ENST00000613261 223 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 U6.90-201ENST00000614007 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 AC022960.3-201ENST00000619794 441 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 U6.70-201ENST00000620287 104 ntBASIC-1.1□□□□□ -2.59
POLR1AO95602 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 MT-TN-201ENST00000387400 73 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 RNA5SP95-201ENST00000410319 137 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 RNU2-42P-201ENST00000410697 113 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 POLR2KP2-201ENST00000438155 177 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 RNU7-57P-201ENST00000459540 60 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 RNU7-140P-201ENST00000459546 60 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 SNRPGP7-201ENST00000469016 106 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
POLR1AO95602 AC079395.1-201ENST00000510981 262 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 SNORA18.7-201ENST00000516910 131 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 AP003168.1-201ENST00000530091 307 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 AC040926.1-201ENST00000530195 238 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.11□□□□□ -2.59
POLR1AO95602 SNORD114-25-201ENST00000363742 72 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 RNU6-811P-201ENST00000384069 107 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 MTND3P20-201ENST00000407663 186 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 AL355994.1-201ENST00000424379 260 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.12□□□□□ -2.59
POLR1AO95602 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.12□□□□□ -2.59
POLR1AO95602 MIR4771-2-201ENST00000577758 74 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 MIR4771-1-201ENST00000582617 74 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 Z99289.3-201ENST00000605586 594 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 U6.73-201ENST00000619194 103 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 AC026585.1-201ENST00000619582 524 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 MIRLET7C-201ENST00000362160 84 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 RNU6-1122P-201ENST00000384449 107 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 RNA5SP482-201ENST00000391269 118 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 USP9YP21-201ENST00000420603 432 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 AL512326.2-201ENST00000426359 151 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 AC010975.2-201ENST00000427781 588 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 MTND1P4-201ENST00000435196 415 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 MIR3925-201ENST00000584674 77 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 AL596327.1-201ENST00000603629 213 ntBASIC-1.12□□□□□ -2.59
POLR1AO95602 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.12□□□□□ -2.59
POLR1AO95602 RNU6-353P-201ENST00000364266 108 ntBASIC-1.13□□□□□ -2.59
POLR1AO95602 RNU6-187P-201ENST00000384139 106 ntBASIC-1.13□□□□□ -2.59
POLR1AO95602 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.13□□□□□ -2.59
POLR1AO95602 RNU6-796P-201ENST00000391086 107 ntBASIC-1.13□□□□□ -2.59
POLR1AO95602 AC090960.1-201ENST00000421072 306 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms