Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU6-159P-201ENST00000391080 106 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.9□□□□□ -2.27
SEMA3DO95025 AC245047.3-201ENST00000429428 127 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 DAP3P1-201ENST00000441522 278 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 COX6CP14-201ENST00000469580 174 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 TRBVA-201ENST00000498804 316 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 RNU6-314P-201ENST00000516574 104 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 RNU6-1198P-201ENST00000516904 67 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 MIR3942-201ENST00000585264 109 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 AC124303.1-201ENST00000605703 360 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 AL021879.1-201ENST00000611756 288 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 U6.73-201ENST00000619194 103 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 AC091895.1-201ENST00000624494 256 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 MIR1321-201ENST00000637766 79 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 AC024614.3-201ENST00000637860 256 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 Y_RNA.414-201ENST00000384011 101 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 RNU6-17P-201ENST00000384245 107 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 RNU6-18P-201ENST00000384527 107 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 RNU6-950P-201ENST00000384651 107 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 MIR499A-201ENST00000384903 122 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 RN7SKP200-201ENST00000410564 320 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.89□□□□□ -2.27
SEMA3DO95025 ZNF885P-201ENST00000420174 1098 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 MTATP6P13-201ENST00000438531 667 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.89□□□□□ -2.27
SEMA3DO95025 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.89□□□□□ -2.27
SEMA3DO95025 RNU6-273P-201ENST00000516937 96 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 RNU6-165P-201ENST00000517170 99 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.89□□□□□ -2.27
SEMA3DO95025 AC027419.1-201ENST00000522976 328 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.89□□□□□ -2.27
SEMA3DO95025 AL137100.2-201ENST00000555786 315 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 AC106754.2-201ENST00000623006 233 ntBASIC0.89□□□□□ -2.27
SEMA3DO95025 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.89□□□□□ -2.27
SEMA3DO95025 Y_RNA.100-201ENST00000363141 102 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 Y_RNA.226-201ENST00000364337 114 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 SNORD116-11-201ENST00000383882 92 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 RNU6-793P-201ENST00000384233 104 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 Y_RNA.517-201ENST00000384551 106 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 Y_RNA.533-201ENST00000384596 114 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 MRPL42P3-201ENST00000401492 326 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 DLGAP5P1-201ENST00000430307 464 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 MTCO2P7-201ENST00000446518 666 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 AC092991.1-201ENST00000477176 376 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 HMGN1P7-201ENST00000491722 313 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 RNU6-506P-201ENST00000516553 94 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 AC245505.1-201ENST00000556398 224 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.88□□□□□ -2.27
SEMA3DO95025 MIR5696-201ENST00000578474 85 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 MIR5695-201ENST00000579717 85 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 MIR6504-201ENST00000613520 61 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 MIR8070-201ENST00000616510 88 ntBASIC0.88□□□□□ -2.27
SEMA3DO95025 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.88□□□□□ -2.27
SEMA3DO95025 AC018630.2-201ENST00000534866 2403 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 RNU6-1080P-201ENST00000383982 107 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 MIR10B-201ENST00000385011 110 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 MIR1287-201ENST00000408492 90 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 POLR2J4-204ENST00000418424 324 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.87□□□□□ -2.27
SEMA3DO95025 MTND2P22-201ENST00000444325 1033 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 MTND4P18-201ENST00000447010 465 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.87□□□□□ -2.27
SEMA3DO95025 NDUFB4P10-201ENST00000452541 359 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.87□□□□□ -2.27
SEMA3DO95025 RPL39P38-201ENST00000467018 153 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 AP000870.1-201ENST00000472927 406 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.87□□□□□ -2.27
SEMA3DO95025 SNORD116-28-201ENST00000516123 91 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 RNU7-99P-201ENST00000516271 62 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.87□□□□□ -2.27
SEMA3DO95025 AC091144.1-201ENST00000519573 138 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 AC023157.2-201ENST00000540596 141 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 AC022432.1-201ENST00000595739 310 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 AC090617.10-201ENST00000624308 134 ntBASIC0.87□□□□□ -2.27
SEMA3DO95025 RNU6-1266P-201ENST00000362794 105 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 RNU6-137P-201ENST00000363680 108 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 Y_RNA.179-201ENST00000363844 90 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 Y_RNA.194-201ENST00000363985 102 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 Y_RNA.405-201ENST00000383979 100 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 Y_RNA.451-201ENST00000384200 100 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 SNORA25-201ENST00000384384 134 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 Y_RNA.524-201ENST00000384564 100 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 Y_RNA.561-201ENST00000384694 100 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 AC243428.1-201ENST00000421099 264 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 SNORD65B-201ENST00000459126 73 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 RNU6-922P-201ENST00000516753 99 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 AC024909.2-201ENST00000553035 286 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.86□□□□□ -2.27
SEMA3DO95025 AC004584.2-201ENST00000570407 410 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 MIR4438-201ENST00000585271 93 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 AL022345.2-201ENST00000606307 135 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 SNORD3E-202ENST00000627253 216 ntBASIC0.86□□□□□ -2.27
SEMA3DO95025 Y_RNA.48-201ENST00000362710 103 ntBASIC0.85□□□□□ -2.27
SEMA3DO95025 RNU6-1059P-201ENST00000363752 98 ntBASIC0.85□□□□□ -2.27
SEMA3DO95025 RNU6-280P-201ENST00000364145 104 ntBASIC0.85□□□□□ -2.27
SEMA3DO95025 RNU6-505P-201ENST00000384427 107 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms