Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VAMP4O75379 AL365361.1-201ENST00000566942 3481 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VAMP4O75379 Y_RNA.361-201ENST00000365515 120 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 MIR27B-201ENST00000385129 97 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 MIR548B-201ENST00000385247 97 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 AL031003.1-201ENST00000404229 172 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 MICF-203ENST00000432679 129 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.27□□□□□ -1.89
VAMP4O75379 AC074198.2-201ENST00000508153 258 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 SCARNA17.1-201ENST00000516211 143 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 SCARNA17.2-201ENST00000516334 143 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 AC136628.3-201ENST00000521868 290 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.27□□□□□ -1.89
VAMP4O75379 MIR3684-201ENST00000579779 74 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 MIR4308-201ENST00000580634 81 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.27□□□□□ -1.89
VAMP4O75379 SCARNA17.4-201ENST00000614296 143 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 MIR6817-201ENST00000615588 66 ntBASIC3.27□□□□□ -1.89
VAMP4O75379 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VAMP4O75379 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.27□□□□□ -1.89
VAMP4O75379 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VAMP4O75379 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.26□□□□□ -1.89
VAMP4O75379 RNU6-923P-201ENST00000364753 107 ntBASIC3.26□□□□□ -1.89
VAMP4O75379 MIR518C-201ENST00000384822 101 ntBASIC3.26□□□□□ -1.89
VAMP4O75379 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.26□□□□□ -1.89
VAMP4O75379 MRPS18CP4-201ENST00000535821 231 ntBASIC3.26□□□□□ -1.89
VAMP4O75379 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.26□□□□□ -1.89
VAMP4O75379 U6.115-201ENST00000636045 103 ntBASIC3.26□□□□□ -1.89
VAMP4O75379 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
VAMP4O75379 RNU6-801P-201ENST00000364087 105 ntBASIC3.25□□□□□ -1.89
VAMP4O75379 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.25□□□□□ -1.89
VAMP4O75379 RNA5SP344-201ENST00000411081 104 ntBASIC3.25□□□□□ -1.89
VAMP4O75379 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.25□□□□□ -1.89
VAMP4O75379 BTF3P11-201ENST00000426582 477 ntBASIC3.25□□□□□ -1.89
VAMP4O75379 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.25□□□□□ -1.89
VAMP4O75379 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.25□□□□□ -1.89
VAMP4O75379 RNU6-1098P-201ENST00000516772 96 ntBASIC3.25□□□□□ -1.89
VAMP4O75379 Y_RNA.703-201ENST00000516846 111 ntBASIC3.25□□□□□ -1.89
VAMP4O75379 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.25□□□□□ -1.89
VAMP4O75379 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.25□□□□□ -1.89
VAMP4O75379 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.25□□□□□ -1.89
VAMP4O75379 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VAMP4O75379 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.24□□□□□ -1.89
VAMP4O75379 SNORD114-7-201ENST00000362520 77 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 RNU1-109P-201ENST00000383960 147 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 RNU6-493P-201ENST00000391321 108 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 MIR300-201ENST00000401138 83 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 MIR1294-201ENST00000408503 142 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 MIR1185-2-201ENST00000408687 86 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.24□□□□□ -1.89
VAMP4O75379 MRPS36P2-201ENST00000512569 299 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 RNU5F-4P-201ENST00000516581 114 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 RPPH1-2P-201ENST00000516688 293 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.24□□□□□ -1.89
VAMP4O75379 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.24□□□□□ -1.89
VAMP4O75379 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.24□□□□□ -1.89
VAMP4O75379 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
VAMP4O75379 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.24□□□□□ -1.89
VAMP4O75379 AC010329.5-201ENST00000623497 2174 ntBASIC3.24□□□□□ -1.89
VAMP4O75379 RNU6-774P-201ENST00000363238 107 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 RNA5SP456-201ENST00000364002 114 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 RNU6-1305P-201ENST00000364353 104 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 Y_RNA.368-201ENST00000365547 113 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 RNU6-125P-201ENST00000384505 107 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 SNORA67.4-201ENST00000384688 142 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 RNU6-763P-201ENST00000390865 106 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 AL357139.1-201ENST00000407792 426 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 RN7SKP51-201ENST00000410781 304 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
VAMP4O75379 AC109329.2-201ENST00000519658 482 ntBASIC3.23□□□□□ -1.89
VAMP4O75379 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.23□□□□□ -1.89
VAMP4O75379 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.22□□□□□ -1.89
VAMP4O75379 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
VAMP4O75379 Y_RNA.506-201ENST00000384494 102 ntBASIC3.22□□□□□ -1.89
VAMP4O75379 MIR592-201ENST00000384959 97 ntBASIC3.22□□□□□ -1.89
VAMP4O75379 U6atac.2-201ENST00000408644 118 ntBASIC3.22□□□□□ -1.89
VAMP4O75379 RNU6-394P-201ENST00000410735 107 ntBASIC3.22□□□□□ -1.89
VAMP4O75379 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.22□□□□□ -1.89
VAMP4O75379 HMGN2P9-201ENST00000476875 229 ntBASIC3.22□□□□□ -1.89
VAMP4O75379 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.22□□□□□ -1.89
VAMP4O75379 HMGB3P3-201ENST00000510526 400 ntBASIC3.22□□□□□ -1.89
VAMP4O75379 SUMO2P18-201ENST00000518873 252 ntBASIC3.22□□□□□ -1.89
VAMP4O75379 AC018630.3-201ENST00000542637 96 ntBASIC3.22□□□□□ -1.89
VAMP4O75379 MIR3133-201ENST00000583157 78 ntBASIC3.22□□□□□ -1.89
VAMP4O75379 AL136360.1-201ENST00000503377 1900 ntBASIC3.22□□□□□ -1.89
VAMP4O75379 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VAMP4O75379 RNU1-72P-201ENST00000362976 153 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 RNY1P5-201ENST00000383890 115 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.21□□□□□ -1.9
VAMP4O75379 AC092427.1-202ENST00000430569 476 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 U8.19-201ENST00000459095 133 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.21□□□□□ -1.9
VAMP4O75379 SNORA70.12-201ENST00000516084 153 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 RNU6-1278P-201ENST00000516130 107 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 RNU6-1219P-201ENST00000516143 112 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms