Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNA5SP219-201ENST00000390940 113 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 RNU6-1186P-201ENST00000410429 97 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 MTATP6P18-201ENST00000417994 673 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.56□□□□□ -2.32
SHOX2O60902 FABP5P4-201ENST00000437203 171 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 AC005002.2-201ENST00000438228 269 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.56□□□□□ -2.32
SHOX2O60902 RNA5SP54-201ENST00000516951 92 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 MIR5583-1-201ENST00000580941 59 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 AC234772.3-201ENST00000602277 528 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 U6.73-201ENST00000619194 103 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SHOX2O60902 Y_RNA.35-201ENST00000362601 101 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 RNA5SP361-201ENST00000362686 118 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 RNU6-1317P-201ENST00000364582 104 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 SNORA2.2-201ENST00000365473 135 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SHOX2O60902 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.55□□□□□ -2.32
SHOX2O60902 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.55□□□□□ -2.32
SHOX2O60902 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.55□□□□□ -2.32
SHOX2O60902 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.55□□□□□ -2.32
SHOX2O60902 RNU7-125P-201ENST00000458760 62 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 RNU7-63P-201ENST00000459054 62 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 MTCO3P38-201ENST00000468910 766 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 AF186996.7-201ENST00000492781 209 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 RNU6-947P-201ENST00000516264 106 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 RNU1-117P-201ENST00000517041 158 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 RNU7-128P-201ENST00000517247 62 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SHOX2O60902 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.55□□□□□ -2.32
SHOX2O60902 AC104465.1-201ENST00000611365 139 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 HULC.1-201ENST00000612720 240 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 FER-210ENST00000628534 558 ntTSL 5 BASIC0.55□□□□□ -2.32
SHOX2O60902 MIR5087-201ENST00000635826 76 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 CASC19-280ENST00000642102 1351 ntBASIC0.55□□□□□ -2.32
SHOX2O60902 ZNF204P-201ENST00000416749 2397 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 AP000568.1-201ENST00000282964 442 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 RNA5SP368-201ENST00000364298 116 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.54□□□□□ -2.32
SHOX2O60902 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.54□□□□□ -2.32
SHOX2O60902 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 MTCO2P7-201ENST00000446518 666 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 RNU7-90P-201ENST00000459216 62 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 SNORA70.12-201ENST00000516084 153 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 RNU6-430P-201ENST00000517078 107 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 MTND1P35-201ENST00000526739 508 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.54□□□□□ -2.32
SHOX2O60902 MIR4778-201ENST00000577635 80 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 MIR3913-1-201ENST00000577744 102 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 MTND1P15-201ENST00000579262 949 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 AC080078.2-201ENST00000603766 501 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 RMST_3.1-201ENST00000611651 109 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 OR5AK4P-201ENST00000635912 903 ntBASIC0.54□□□□□ -2.32
SHOX2O60902 RNU4-21P-201ENST00000362802 126 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 Y_RNA.201-201ENST00000364052 96 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 RNU6-996P-201ENST00000365438 107 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 RNY3P10-201ENST00000384764 102 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 AL049545.1-201ENST00000401856 572 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.53□□□□□ -2.32
SHOX2O60902 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.53□□□□□ -2.32
SHOX2O60902 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.53□□□□□ -2.32
SHOX2O60902 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.53□□□□□ -2.32
SHOX2O60902 RNU7-21P-201ENST00000459430 62 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 RPS26P48-201ENST00000491713 339 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.53□□□□□ -2.32
SHOX2O60902 RNU6-189P-201ENST00000516120 101 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 RNA5SP454-201ENST00000517231 127 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.53□□□□□ -2.32
SHOX2O60902 MIR4802-201ENST00000581881 80 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 AC004223.2-201ENST00000590309 544 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 AC010620.1-201ENST00000601088 1102 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 AC064836.2-201ENST00000609491 462 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 AC109347.2-201ENST00000610220 349 ntBASIC0.53□□□□□ -2.32
SHOX2O60902 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.33
SHOX2O60902 U3.8-201ENST00000363675 217 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 RNU6-82P-201ENST00000363970 107 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 RNU6-1329P-201ENST00000365664 107 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 RNU6-1126P-201ENST00000384002 107 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 RNU6-784P-201ENST00000384330 106 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 MIR605-201ENST00000385078 83 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 AL606923.1-201ENST00000406616 190 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.52□□□□□ -2.33
SHOX2O60902 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.52□□□□□ -2.33
SHOX2O60902 MTCO2P11-201ENST00000431069 680 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 STAG3L5P-204ENST00000443759 179 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 AC022493.2-201ENST00000506122 481 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 RNU6-1198P-201ENST00000516904 67 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 MTND1P5-201ENST00000517906 940 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.52□□□□□ -2.33
SHOX2O60902 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.52□□□□□ -2.33
SHOX2O60902 Y_RNA.757-201ENST00000578934 114 ntBASIC0.52□□□□□ -2.33
SHOX2O60902 MIR8076-201ENST00000611401 83 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms