Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 RNU6-625P-201ENST00000459412 107 ntBASIC3.36□□□□□ -1.87
SMARCA5O60264 AC007215.1-201ENST00000464893 276 ntBASIC3.36□□□□□ -1.87
SMARCA5O60264 AC018868.1-201ENST00000491307 315 ntBASIC3.36□□□□□ -1.87
SMARCA5O60264 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.36□□□□□ -1.87
SMARCA5O60264 AC018448.1-201ENST00000552843 316 ntBASIC3.36□□□□□ -1.87
SMARCA5O60264 AC026271.5-201ENST00000577873 130 ntBASIC3.36□□□□□ -1.87
SMARCA5O60264 AL008718.3-201ENST00000610217 321 ntBASIC3.36□□□□□ -1.87
SMARCA5O60264 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMARCA5O60264 RNU5F-3P-201ENST00000363767 117 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 Y_RNA.304-201ENST00000365011 112 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 MIR483-201ENST00000385070 76 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 Z92545.1-201ENST00000411782 234 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.35□□□□□ -1.87
SMARCA5O60264 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.35□□□□□ -1.87
SMARCA5O60264 RAB28P5-201ENST00000427490 651 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 AC107083.1-201ENST00000439643 279 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 RNA5SP367-201ENST00000516557 118 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 AC007536.1-201ENST00000533382 349 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 MIR548AI-201ENST00000579940 88 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 MIR3605-201ENST00000583214 100 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 SNRPGP20-201ENST00000604477 205 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 AC004467.1-201ENST00000615678 330 ntBASIC3.35□□□□□ -1.87
SMARCA5O60264 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.35□□□□□ -1.87
SMARCA5O60264 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMARCA5O60264 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SMARCA5O60264 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SMARCA5O60264 SNORA80A-201ENST00000363922 136 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 Y_RNA.262-201ENST00000364641 102 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 Y_RNA.441-201ENST00000384123 112 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 RNU1-148P-201ENST00000384472 162 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 AL357139.1-201ENST00000407792 426 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 AC007064.1-201ENST00000412238 351 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.34□□□□□ -1.87
SMARCA5O60264 AC091179.3-201ENST00000474761 144 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.34□□□□□ -1.87
SMARCA5O60264 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.34□□□□□ -1.87
SMARCA5O60264 RNU6-667P-201ENST00000517186 102 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.34□□□□□ -1.87
SMARCA5O60264 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.34□□□□□ -1.87
SMARCA5O60264 MIR3126-201ENST00000577443 74 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 DEFB117-201ENST00000602356 141 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 AC108706.1-201ENST00000611053 297 ntBASIC3.34□□□□□ -1.87
SMARCA5O60264 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.34□□□□□ -1.87
SMARCA5O60264 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.34□□□□□ -1.87
SMARCA5O60264 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SMARCA5O60264 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMARCA5O60264 MIR26A1-201ENST00000362205 77 ntBASIC3.33□□□□□ -1.88
SMARCA5O60264 RNU6-818P-201ENST00000364837 108 ntBASIC3.33□□□□□ -1.88
SMARCA5O60264 RNU1-52P-201ENST00000384190 164 ntBASIC3.33□□□□□ -1.88
SMARCA5O60264 SNORA12-201ENST00000391162 147 ntBASIC3.33□□□□□ -1.88
SMARCA5O60264 RNU2-52P-201ENST00000410680 190 ntBASIC3.33□□□□□ -1.88
SMARCA5O60264 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCA5O60264 AC245102.2-201ENST00000448956 180 ntBASIC3.33□□□□□ -1.88
SMARCA5O60264 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCA5O60264 SUMO2P18-201ENST00000518873 252 ntBASIC3.33□□□□□ -1.88
SMARCA5O60264 AP001485.1-201ENST00000604799 199 ntBASIC3.33□□□□□ -1.88
SMARCA5O60264 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.33□□□□□ -1.88
SMARCA5O60264 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.32□□□□□ -1.88
SMARCA5O60264 RNU6-727P-201ENST00000363592 107 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 Y_RNA.179-201ENST00000363844 90 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 Y_RNA.272-201ENST00000364696 102 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 SNORA72.2-201ENST00000365028 127 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 RNU6-234P-201ENST00000365229 104 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 SNORD116-18-201ENST00000383961 92 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 RNA5SP344-201ENST00000411081 104 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 HMGN2P35-201ENST00000412164 270 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 SRIP3-201ENST00000413200 219 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCA5O60264 AC105272.1-201ENST00000438604 198 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 RNU6-155P-201ENST00000516347 100 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 SNORA9.3-201ENST00000516383 129 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 GTF3AP2-201ENST00000557014 266 ntBASIC3.32□□□□□ -1.88
SMARCA5O60264 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMARCA5O60264 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SMARCA5O60264 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMARCA5O60264 RNU1-91P-201ENST00000364746 163 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 SNORA40.19-201ENST00000390846 128 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 RNU6-131P-201ENST00000391144 107 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 RNU2-48P-201ENST00000410694 191 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 EDDM3CP-201ENST00000415977 425 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 AL139281.1-201ENST00000422120 335 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 COTL1P1-201ENST00000422309 375 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCA5O60264 RN7SL297P-201ENST00000483161 293 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 RNA5SP137-201ENST00000516833 135 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 RNU1-104P-201ENST00000517280 175 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 AP005660.1-201ENST00000522972 293 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 MIR5692C2-201ENST00000577959 77 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 AC068700.1-201ENST00000565862 3754 ntBASIC3.31□□□□□ -1.88
SMARCA5O60264 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
SMARCA5O60264 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SMARCA5O60264 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.3□□□□□ -1.88
SMARCA5O60264 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMARCA5O60264 RNU6-1272P-201ENST00000362776 107 ntBASIC3.3□□□□□ -1.88
SMARCA5O60264 Y_RNA.498-201ENST00000384460 102 ntBASIC3.3□□□□□ -1.88
SMARCA5O60264 Y_RNA.571-201ENST00000384753 98 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms