Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 SNORA80E-201ENST00000384744 137 ntBASIC1.97□□□□□ -2.09
PRKNO60260 MIR586-201ENST00000385035 97 ntBASIC1.97□□□□□ -2.09
PRKNO60260 MIR300-201ENST00000401138 83 ntBASIC1.97□□□□□ -2.09
PRKNO60260 AC005002.2-201ENST00000438228 269 ntBASIC1.97□□□□□ -2.09
PRKNO60260 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.97□□□□□ -2.09
PRKNO60260 IGLV3-17-201ENST00000519099 244 ntBASIC1.97□□□□□ -2.09
PRKNO60260 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.97□□□□□ -2.09
PRKNO60260 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
PRKNO60260 MIR376A1-201ENST00000616574 68 ntBASIC1.97□□□□□ -2.09
PRKNO60260 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
PRKNO60260 MIR7843-201ENST00000622274 79 ntBASIC1.97□□□□□ -2.09
PRKNO60260 AC008873.1-201ENST00000625051 138 ntBASIC1.97□□□□□ -2.09
PRKNO60260 MIR203B-201ENST00000636080 86 ntBASIC1.97□□□□□ -2.09
PRKNO60260 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PRKNO60260 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PRKNO60260 Y_RNA.193-201ENST00000363979 102 ntBASIC1.96□□□□□ -2.1
PRKNO60260 Y_RNA.222-201ENST00000364264 102 ntBASIC1.96□□□□□ -2.1
PRKNO60260 Y_RNA.276-201ENST00000364732 109 ntBASIC1.96□□□□□ -2.1
PRKNO60260 RNU6-713P-201ENST00000384761 107 ntBASIC1.96□□□□□ -2.1
PRKNO60260 MIR548B-201ENST00000385247 97 ntBASIC1.96□□□□□ -2.1
PRKNO60260 MIR1302-3-201ENST00000408128 138 ntBASIC1.96□□□□□ -2.1
PRKNO60260 RNU6-121P-201ENST00000410525 99 ntBASIC1.96□□□□□ -2.1
PRKNO60260 AL139156.1-201ENST00000412785 841 ntBASIC1.96□□□□□ -2.1
PRKNO60260 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.96□□□□□ -2.1
PRKNO60260 LINC01399-202ENST00000458450 244 ntBASIC1.96□□□□□ -2.1
PRKNO60260 AC104435.1-201ENST00000483483 166 ntBASIC1.96□□□□□ -2.1
PRKNO60260 AC093259.1-201ENST00000509755 300 ntBASIC1.96□□□□□ -2.1
PRKNO60260 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.96□□□□□ -2.1
PRKNO60260 AP002001.1-203ENST00000534002 267 ntBASIC1.96□□□□□ -2.1
PRKNO60260 AC055872.1-201ENST00000570978 278 ntBASIC1.96□□□□□ -2.1
PRKNO60260 MIR4300-201ENST00000581016 96 ntBASIC1.96□□□□□ -2.1
PRKNO60260 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
PRKNO60260 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.96□□□□□ -2.1
PRKNO60260 AC005176.2-201ENST00000596933 147 ntBASIC1.96□□□□□ -2.1
PRKNO60260 AL109918.3-201ENST00000603072 338 ntBASIC1.96□□□□□ -2.1
PRKNO60260 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
PRKNO60260 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PRKNO60260 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRKNO60260 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.95□□□□□ -2.1
PRKNO60260 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.95□□□□□ -2.1
PRKNO60260 SNORA72.2-201ENST00000365028 127 ntBASIC1.95□□□□□ -2.1
PRKNO60260 RNU6-1264P-201ENST00000383891 107 ntBASIC1.95□□□□□ -2.1
PRKNO60260 RNU6-418P-201ENST00000384035 107 ntBASIC1.95□□□□□ -2.1
PRKNO60260 RNU6-505P-201ENST00000384427 107 ntBASIC1.95□□□□□ -2.1
PRKNO60260 RPL21P38-201ENST00000418090 167 ntBASIC1.95□□□□□ -2.1
PRKNO60260 AL731563.1-201ENST00000442202 214 ntBASIC1.95□□□□□ -2.1
PRKNO60260 AC016717.1-201ENST00000448918 286 ntBASIC1.95□□□□□ -2.1
PRKNO60260 PRELID3BP1-201ENST00000457142 540 ntBASIC1.95□□□□□ -2.1
PRKNO60260 AC016925.1-201ENST00000458303 298 ntBASIC1.95□□□□□ -2.1
PRKNO60260 snoU13.26-201ENST00000459452 105 ntBASIC1.95□□□□□ -2.1
PRKNO60260 AC114982.1-201ENST00000469402 321 ntBASIC1.95□□□□□ -2.1
PRKNO60260 AC098869.1-201ENST00000481627 292 ntBASIC1.95□□□□□ -2.1
PRKNO60260 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.95□□□□□ -2.1
PRKNO60260 AL161670.1-201ENST00000554348 137 ntBASIC1.95□□□□□ -2.1
PRKNO60260 AC004817.2-201ENST00000561794 651 ntBASIC1.95□□□□□ -2.1
PRKNO60260 MIR3674-201ENST00000636576 68 ntBASIC1.95□□□□□ -2.1
PRKNO60260 LINC02555-201ENST00000563933 1951 ntBASIC1.95□□□□□ -2.1
PRKNO60260 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRKNO60260 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRKNO60260 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRKNO60260 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
PRKNO60260 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.94□□□□□ -2.1
PRKNO60260 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.94□□□□□ -2.1
PRKNO60260 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
PRKNO60260 U3.8-201ENST00000363675 217 ntBASIC1.94□□□□□ -2.1
PRKNO60260 SNORA48.3-201ENST00000391081 134 ntBASIC1.94□□□□□ -2.1
PRKNO60260 RNU4-30P-201ENST00000410245 143 ntBASIC1.94□□□□□ -2.1
PRKNO60260 RNU2-2P-201ENST00000410396 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 Y_RNA.602-201ENST00000410535 92 ntBASIC1.94□□□□□ -2.1
PRKNO60260 RNA5SP475-201ENST00000410568 110 ntBASIC1.94□□□□□ -2.1
PRKNO60260 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.94□□□□□ -2.1
PRKNO60260 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.94□□□□□ -2.1
PRKNO60260 AL137159.1-201ENST00000452808 512 ntBASIC1.94□□□□□ -2.1
PRKNO60260 RNU7-57P-201ENST00000459540 60 ntBASIC1.94□□□□□ -2.1
PRKNO60260 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.94□□□□□ -2.1
PRKNO60260 AC107222.1-201ENST00000510899 637 ntBASIC1.94□□□□□ -2.1
PRKNO60260 RNU6-1143P-201ENST00000516125 104 ntBASIC1.94□□□□□ -2.1
PRKNO60260 AP003733.2-201ENST00000529409 171 ntBASIC1.94□□□□□ -2.1
PRKNO60260 AC121758.2-201ENST00000553271 193 ntBASIC1.94□□□□□ -2.1
PRKNO60260 MIR3671-201ENST00000580455 88 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.15-201ENST00000611544 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.16-201ENST00000613119 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.12-201ENST00000613778 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.20-201ENST00000613956 192 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.9-201ENST00000615427 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 AC004467.1-201ENST00000615678 330 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.11-201ENST00000616345 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.2-201ENST00000616535 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.3-201ENST00000617785 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.19-201ENST00000618602 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 RNU2-1-201ENST00000618664 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.6-201ENST00000619225 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.5-201ENST00000619465 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U2.10-201ENST00000620268 191 ntBASIC1.94□□□□□ -2.1
PRKNO60260 U4.1-201ENST00000620349 87 ntBASIC1.94□□□□□ -2.1
PRKNO60260 AC091932.3-201ENST00000624223 323 ntBASIC1.94□□□□□ -2.1
PRKNO60260 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PRKNO60260 MIRLET7G-201ENST00000362280 84 ntBASIC1.93□□□□□ -2.1
PRKNO60260 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
PRKNO60260 RNU6-702P-201ENST00000364982 107 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms