Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PDLIM1O00151 AC100821.1-201ENST00000523153 2479 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.39□□□□□ -2.19
PDLIM1O00151 RNU6-939P-201ENST00000384634 107 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 FGF7P8-201ENST00000402994 292 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 COX6CP10-201ENST00000416832 224 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 Y_RNA.635-201ENST00000459041 101 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 AC005908.1-201ENST00000468701 347 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 MTND4P17-201ENST00000470444 350 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 AL163195.1-201ENST00000496941 348 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 AC116353.2-201ENST00000505332 712 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 Y_RNA.675-201ENST00000516389 149 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 SCARNA16.2-201ENST00000516520 172 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 RNU1-142P-201ENST00000516682 145 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.39□□□□□ -2.19
PDLIM1O00151 AC092794.2-201ENST00000620933 563 ntBASIC1.39□□□□□ -2.19
PDLIM1O00151 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
PDLIM1O00151 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PDLIM1O00151 RNA5SP432-201ENST00000362480 116 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 RNU6-457P-201ENST00000363999 107 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 RNU6-879P-201ENST00000364328 108 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 SNORA63D-201ENST00000364359 132 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 SNORD81.2-201ENST00000365153 76 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 MIR517C-201ENST00000385103 95 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 Y_RNA.595-201ENST00000410403 105 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 RPL30P13-201ENST00000418873 348 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 PDCL2P1-201ENST00000419302 352 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.38□□□□□ -2.19
PDLIM1O00151 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.38□□□□□ -2.19
PDLIM1O00151 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.38□□□□□ -2.19
PDLIM1O00151 UBE2V1P7-201ENST00000446395 340 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 MTND4P18-201ENST00000447010 465 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 RPL26P26-201ENST00000480251 434 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 PRDX4P1-201ENST00000507189 574 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 RNU6-1213P-201ENST00000517075 94 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 AC091144.1-201ENST00000519573 138 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 AC105029.1-201ENST00000520250 669 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 AC024995.1-201ENST00000523014 93 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.38□□□□□ -2.19
PDLIM1O00151 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.38□□□□□ -2.19
PDLIM1O00151 AC016727.1-205ENST00000605437 569 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 AL359075.3-201ENST00000613288 217 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 AC022306.2-201ENST00000617563 647 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 AL669831.3-213ENST00000636676 183 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 TPTEP1-208ENST00000636884 213 ntBASIC1.38□□□□□ -2.19
PDLIM1O00151 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
PDLIM1O00151 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PDLIM1O00151 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 Y_RNA.166-201ENST00000363730 102 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 Y_RNA.358-201ENST00000365491 99 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 Y_RNA.557-201ENST00000384680 107 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 MIR1323-201ENST00000408090 73 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 RNU6-1186P-201ENST00000410429 97 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 RNU6-1001P-201ENST00000411265 100 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 EIF1P2-201ENST00000428233 350 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 AC098614.3-201ENST00000438957 440 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 JTBP1-201ENST00000441314 247 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 snoU13.27-201ENST00000459278 104 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 RPL17P19-201ENST00000489069 552 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 HMGN1P12-201ENST00000499125 195 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.37□□□□□ -2.19
PDLIM1O00151 Y_RNA.691-201ENST00000516611 103 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 AC022868.1-201ENST00000517767 391 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 APOOP3-201ENST00000536787 586 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.37□□□□□ -2.19
PDLIM1O00151 AL137100.2-201ENST00000555786 315 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 AC004584.2-201ENST00000570407 410 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 BX248123.2-201ENST00000606318 124 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 MIR8063-201ENST00000621930 81 ntBASIC1.37□□□□□ -2.19
PDLIM1O00151 RNU1-78P-201ENST00000391248 165 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 RNU4-14P-201ENST00000410858 122 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 UQCRBP2-201ENST00000447827 297 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 RNU6-264P-201ENST00000517134 104 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 CYCSP23-201ENST00000519781 313 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 AC027419.1-201ENST00000522976 328 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 SUB1P3-201ENST00000564581 315 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 FRG2DP-202ENST00000566967 323 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 SNORD53B-201ENST00000577887 78 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 MIR4303-201ENST00000581299 66 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 MIR5690-201ENST00000583739 73 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 MIR1244-1-201ENST00000612829 85 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 MIR1244-3-201ENST00000635744 85 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 MIR1244-2-201ENST00000636449 85 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 MIR1244-4-202ENST00000636813 85 ntBASIC1.36□□□□□ -2.19
PDLIM1O00151 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
PDLIM1O00151 RNU6-874P-201ENST00000362390 105 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 RNU6-99P-201ENST00000364721 107 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 SNORA4.2-201ENST00000365313 147 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 MIR329-1-201ENST00000385028 80 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 RNA5SP109-201ENST00000391010 116 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 RNU6-370P-201ENST00000411008 104 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 RNU6-1304P-201ENST00000411374 106 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.35□□□□□ -2.19
PDLIM1O00151 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.35□□□□□ -2.19
PDLIM1O00151 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.35□□□□□ -2.19
PDLIM1O00151 MIR4709-201ENST00000577272 72 ntBASIC1.35□□□□□ -2.19
PDLIM1O00151 SNORA77B-201ENST00000578179 125 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms