Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 U2.15-201ENST00000611544 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.16-201ENST00000613119 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.12-201ENST00000613778 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.20-201ENST00000613956 192 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.9-201ENST00000615427 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.11-201ENST00000616345 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.2-201ENST00000616535 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.3-201ENST00000617785 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.19-201ENST00000618602 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 RNU2-1-201ENST00000618664 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.6-201ENST00000619225 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.5-201ENST00000619465 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U2.10-201ENST00000620268 191 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 U6.115-201ENST00000636045 103 ntBASIC2.14□□□□□ -2.07
NPIPB4C9JG80 SNORD113-8-201ENST00000363497 74 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 RNU6-525P-201ENST00000363685 104 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 Y_RNA.574-201ENST00000384766 95 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 MIR1283-2-201ENST00000408621 87 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NPIPB4C9JG80 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.13□□□□□ -2.07
NPIPB4C9JG80 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.13□□□□□ -2.07
NPIPB4C9JG80 DYNLT3P2-201ENST00000442517 295 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 SNORD65B-201ENST00000459126 73 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 HMGN1P10-201ENST00000474557 553 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 AL049873.1-201ENST00000480540 376 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 AP003733.2-201ENST00000529409 171 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 MIR3162-201ENST00000581818 82 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 MIR5007-201ENST00000583098 95 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.13□□□□□ -2.07
NPIPB4C9JG80 AC005828.6-201ENST00000606610 232 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.13□□□□□ -2.07
NPIPB4C9JG80 CTSLP2-204ENST00000629029 392 ntBASIC2.13□□□□□ -2.07
NPIPB4C9JG80 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NPIPB4C9JG80 MIR21-201ENST00000362134 72 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 SNORD114-7-201ENST00000362520 77 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 RNU4-90P-201ENST00000362773 141 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 snoU2-30.2-201ENST00000362805 70 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 Y_RNA.105-201ENST00000363182 111 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 Y_RNA.133-201ENST00000363428 110 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 RNU6-271P-201ENST00000363858 105 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 SNORD115-30-201ENST00000364117 82 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 SNORA6-201ENST00000384033 151 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 Y_RNA.581-201ENST00000391017 97 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 RNU6-121P-201ENST00000410525 99 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 IPO7P1-201ENST00000442031 636 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 AC108938.1-201ENST00000451204 136 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 RNU6-1041P-201ENST00000516254 102 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.12□□□□□ -2.07
NPIPB4C9JG80 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.12□□□□□ -2.07
NPIPB4C9JG80 MYL12BP1-201ENST00000569826 507 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 AC007229.1-201ENST00000590455 412 ntBASIC2.12□□□□□ -2.07
NPIPB4C9JG80 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.12□□□□□ -2.07
NPIPB4C9JG80 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.12□□□□□ -2.07
NPIPB4C9JG80 Y_RNA.64-201ENST00000362845 102 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 RNU6-806P-201ENST00000365147 105 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 RNU4-30P-201ENST00000410245 143 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 Y_RNA.602-201ENST00000410535 92 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 RNU6-1199P-201ENST00000411249 104 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 CR769767.1-201ENST00000436337 346 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 HMGN2P34-201ENST00000437647 269 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.11□□□□□ -2.07
NPIPB4C9JG80 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.11□□□□□ -2.07
NPIPB4C9JG80 AC234781.5-201ENST00000508429 271 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 MTCO2P24-201ENST00000515611 426 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 RNA5SP148-201ENST00000516527 94 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 RNA5SP402-201ENST00000517148 110 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 RNU2-19P-201ENST00000517288 84 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 AP005660.1-201ENST00000522972 293 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 AL137100.2-201ENST00000555786 315 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 SDR42E1P4-201ENST00000620894 481 ntBASIC2.11□□□□□ -2.07
NPIPB4C9JG80 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
NPIPB4C9JG80 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPIPB4C9JG80 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.11□□□□□ -2.07
NPIPB4C9JG80 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.11□□□□□ -2.07
NPIPB4C9JG80 Y_RNA.26-201ENST00000362539 101 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 Y_RNA.47-201ENST00000362697 108 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 RNU6-238P-201ENST00000363313 106 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 SNORA5B-201ENST00000363786 132 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 RNU6-324P-201ENST00000363957 106 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 Y_RNA.361-201ENST00000365515 120 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 SNORA20B-201ENST00000384220 132 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 MIR515-2-201ENST00000384883 83 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 MIR515-1-201ENST00000384884 83 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 MIR873-201ENST00000401120 77 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 AL355497.1-201ENST00000406262 551 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 MIR1302-3-201ENST00000408128 138 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 U3.40-201ENST00000408706 208 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 SNORA11.4-201ENST00000408823 129 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.1□□□□□ -2.07
NPIPB4C9JG80 RPL21P38-201ENST00000418090 167 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 AC096920.1-201ENST00000423991 241 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 MTCYBP9-201ENST00000431021 303 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 HMGN2P3-201ENST00000433603 273 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 HMGN2P5-201ENST00000436882 273 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 MTND3P2-201ENST00000438452 342 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 AC026436.1-201ENST00000510537 270 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 SNORA70.12-201ENST00000516084 153 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 RNU6-496P-201ENST00000516145 99 ntBASIC2.1□□□□□ -2.07
NPIPB4C9JG80 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms