Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 AC245008.1-201ENST00000608123 476 ntBASIC0.86□□□□□ -2.27
SMCO2A6NFE2 AL021879.1-201ENST00000611756 288 ntBASIC0.86□□□□□ -2.27
SMCO2A6NFE2 AP000770.2-201ENST00000623694 100 ntBASIC0.86□□□□□ -2.27
SMCO2A6NFE2 AC006435.5-201ENST00000624486 112 ntBASIC0.86□□□□□ -2.27
SMCO2A6NFE2 AC124864.2-201ENST00000624736 186 ntBASIC0.86□□□□□ -2.27
SMCO2A6NFE2 SNORD3E-202ENST00000627253 216 ntBASIC0.86□□□□□ -2.27
SMCO2A6NFE2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SMCO2A6NFE2 Y_RNA.100-201ENST00000363141 102 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 Y_RNA.135-201ENST00000363439 95 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 Y_RNA.151-201ENST00000363566 112 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 MIR548J-201ENST00000408833 112 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 RNU6-1068P-201ENST00000410958 103 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 AC245047.7-201ENST00000440265 293 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.85□□□□□ -2.27
SMCO2A6NFE2 RNU7-66P-201ENST00000459469 62 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 AC091179.3-201ENST00000474761 144 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 Y_RNA.665-201ENST00000516177 98 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.85□□□□□ -2.27
SMCO2A6NFE2 MIR5696-201ENST00000578474 85 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 AC010620.1-201ENST00000601088 1102 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 AL138726.1-201ENST00000614873 333 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 AC006504.8-201ENST00000621046 635 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 MIR6863-201ENST00000636112 90 ntBASIC0.85□□□□□ -2.27
SMCO2A6NFE2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
SMCO2A6NFE2 RNU4-76P-201ENST00000364509 141 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 Y_RNA.415-201ENST00000384012 112 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 POLR2J4-204ENST00000418424 324 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 TRBVA-201ENST00000498804 316 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 AC105758.1-201ENST00000506038 399 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 AC010486.3-201ENST00000511602 785 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 AC093303.1-201ENST00000514549 295 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 SNORD79.1-201ENST00000516069 84 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 RNU6-405P-201ENST00000516637 110 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.84□□□□□ -2.27
SMCO2A6NFE2 AC090049.2-201ENST00000550377 109 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 MIR6788-201ENST00000618842 66 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 AC009248.2-201ENST00000619826 254 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 AC068137.4-201ENST00000638485 296 ntBASIC0.84□□□□□ -2.27
SMCO2A6NFE2 Y_RNA.372-201ENST00000365599 102 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 RNU6-259P-201ENST00000383999 107 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 RNU6-908P-201ENST00000410160 94 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 RNU2-66P-201ENST00000410650 161 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 AC114482.1-201ENST00000418010 247 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 AC002429.1-201ENST00000437672 148 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 MTND4P18-201ENST00000447010 465 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 PCMTD1P1-201ENST00000455560 355 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 SNORD65B-201ENST00000459126 73 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 RPL30P10-201ENST00000488148 337 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 AC019235.1-201ENST00000503847 207 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 SCARNA16.2-201ENST00000516520 172 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.83□□□□□ -2.28
SMCO2A6NFE2 MIR4778-201ENST00000577635 80 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 RN7SKP299-201ENST00000606679 301 ntBASIC0.83□□□□□ -2.28
SMCO2A6NFE2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
SMCO2A6NFE2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SMCO2A6NFE2 RNU6-199P-201ENST00000362954 107 ntBASIC0.82□□□□□ -2.28
SMCO2A6NFE2 RNU6-280P-201ENST00000364145 104 ntBASIC0.82□□□□□ -2.28
SMCO2A6NFE2 RNU6-793P-201ENST00000384233 104 ntBASIC0.82□□□□□ -2.28
SMCO2A6NFE2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SMCO2A6NFE2 AC063976.4-201ENST00000421971 163 ntBASIC0.82□□□□□ -2.28
SMCO2A6NFE2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.82□□□□□ -2.28
SMCO2A6NFE2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.82□□□□□ -2.28
SMCO2A6NFE2 MRPS10P1-201ENST00000448483 130 ntBASIC0.82□□□□□ -2.28
SMCO2A6NFE2 HMGN2P26-201ENST00000463169 339 ntBASIC0.82□□□□□ -2.28
SMCO2A6NFE2 RPS26P48-201ENST00000491713 339 ntBASIC0.82□□□□□ -2.28
SMCO2A6NFE2 RNA5SP168-201ENST00000516642 112 ntBASIC0.82□□□□□ -2.28
SMCO2A6NFE2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.82□□□□□ -2.28
SMCO2A6NFE2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.82□□□□□ -2.28
SMCO2A6NFE2 SNORA28-201ENST00000606769 126 ntBASIC0.82□□□□□ -2.28
SMCO2A6NFE2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.82□□□□□ -2.28
SMCO2A6NFE2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.82□□□□□ -2.28
SMCO2A6NFE2 RNU6-1266P-201ENST00000362794 105 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 RNU5F-3P-201ENST00000363767 117 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 RNU6-424P-201ENST00000384367 105 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 AF228730.1-201ENST00000397972 663 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 ZNF885P-201ENST00000420174 1098 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 AC243428.1-201ENST00000421099 264 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.81□□□□□ -2.28
SMCO2A6NFE2 SEPT14P3-201ENST00000439401 183 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 MTCO3P18-201ENST00000440206 761 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 AL732372.2-207ENST00000445840 183 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 RPS4XP11-201ENST00000446897 772 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 SEPT14P2-201ENST00000453405 183 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 SEPT14P4-201ENST00000513445 186 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 RNU6-917P-201ENST00000516294 104 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 FO082796.1-201ENST00000523795 183 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 AL590705.4-201ENST00000532209 134 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 MIR4438-201ENST00000585271 93 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 POLR3GP2-201ENST00000588366 668 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 AC010525.2-201ENST00000590920 195 ntBASIC0.81□□□□□ -2.28
SMCO2A6NFE2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.81□□□□□ -2.28
SMCO2A6NFE2 AC099654.12-201ENST00000639868 649 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms