Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 SCARNA24.2-201ENST00000516968 130 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 AC004817.2-201ENST00000561794 651 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 MIR3145-201ENST00000580727 82 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 AC127459.3-201ENST00000624328 466 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 AC010615.1-201ENST00000594254 1764 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 AL391987.6-201ENST00000305671 199 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 Y_RNA.329-201ENST00000365209 107 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-407P-201ENST00000365280 104 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-514P-201ENST00000384208 107 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 SNORA20B-201ENST00000384220 132 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 MIR181A2-201ENST00000384863 110 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 BX510359.4-201ENST00000423750 193 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 ATP5J2P3-201ENST00000451550 258 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 SUMO1P2-201ENST00000452524 304 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 RNU1-131P-201ENST00000458943 161 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 AC011406.1-201ENST00000512440 370 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-1146P-201ENST00000516282 102 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 SUMO2P18-201ENST00000518873 252 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 AP005660.1-201ENST00000522972 293 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 MIR5194-201ENST00000582634 120 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 DEFB117-201ENST00000602356 141 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 AP001282.2-201ENST00000616149 309 ntBASIC2.37□□□□□ -2.03
MBD3L4A6NDZ8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 SNORA25.1-201ENST00000362326 128 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 RNA5SP68-201ENST00000363885 119 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 SNORA3A-201ENST00000364113 130 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 RNA5SP493-201ENST00000364115 91 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 Y_RNA.237-201ENST00000364439 102 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 AL355796.1-201ENST00000406706 323 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 RNU2-38P-201ENST00000410856 79 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 RPS29P6-201ENST00000438196 145 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 AC010598.1-201ENST00000510378 103 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 AC008413.1-201ENST00000511864 177 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 RNU2-31P-201ENST00000516954 155 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 MIR6817-201ENST00000615588 66 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 AC008264.2-201ENST00000610193 3731 ntBASIC2.36□□□□□ -2.03
MBD3L4A6NDZ8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 RNU1-58P-201ENST00000362413 163 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-271P-201ENST00000363858 105 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 SNORA70B-201ENST00000384210 135 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 RNA5SP344-201ENST00000411081 104 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 AC024067.1-201ENST00000426199 223 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 RPS27P22-201ENST00000478056 241 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 SNORA70.12-201ENST00000516084 153 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 RNU1-41P-201ENST00000516161 162 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-436P-201ENST00000516171 114 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 Y_RNA.668-201ENST00000516233 93 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 RNU1-48P-201ENST00000516400 162 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 MIR3169-201ENST00000578032 83 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 AC005828.6-201ENST00000606610 232 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 AL590808.1-201ENST00000618696 141 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 MTND5P6-201ENST00000422338 1798 ntBASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
MBD3L4A6NDZ8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 snoU2-30.2-201ENST00000362805 70 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 RNU4-80P-201ENST00000363200 141 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 Y_RNA.124-201ENST00000363339 93 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-326P-201ENST00000365480 107 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-417P-201ENST00000384712 107 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 SNORA40.19-201ENST00000390846 128 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 RNU11-3P-201ENST00000391111 133 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 HMGN2P39-201ENST00000398005 273 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 MIR873-201ENST00000401120 77 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 AC007064.1-201ENST00000412238 351 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 AL353689.1-201ENST00000438895 199 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 MTND4LP30-201ENST00000454092 297 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 RN7SL499P-201ENST00000481141 276 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 AC010409.1-201ENST00000487382 476 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 RN7SL636P-201ENST00000497504 294 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 SERF1AP1-201ENST00000514575 187 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 AC023157.2-201ENST00000540596 141 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 MIR4635-201ENST00000583759 79 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 AC062037.2-201ENST00000610137 73 ntBASIC2.34□□□□□ -2.03
MBD3L4A6NDZ8 U2.15-201ENST00000611544 191 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms