Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 MIR3126-201ENST00000577443 74 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 AC026271.5-201ENST00000577873 130 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 AP000942.3-201ENST00000603702 160 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 MIR376A1-201ENST00000616574 68 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 MIR3674-201ENST00000636576 68 ntBASIC2.55□□□□□ -2
TRIM43BA6NCK2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.55□□□□□ -2
TRIM43BA6NCK2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM43BA6NCK2 LINC02555-201ENST00000563933 1951 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 RNU6-238P-201ENST00000363313 106 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 Y_RNA.226-201ENST00000364337 114 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 Y_RNA.230-201ENST00000364348 109 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 Y_RNA.462-201ENST00000384268 102 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 Y_RNA.574-201ENST00000384766 95 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 MIR548B-201ENST00000385247 97 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
TRIM43BA6NCK2 RNU6-1109P-201ENST00000391187 107 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM43BA6NCK2 RPL21P1-201ENST00000399532 476 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 AL023284.1-201ENST00000403956 276 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM43BA6NCK2 AL390729.2-201ENST00000416137 156 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 AL731563.1-201ENST00000442202 214 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 RNU6-948P-201ENST00000516374 107 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.54□□□□□ -2
TRIM43BA6NCK2 CYCSP26-201ENST00000534107 320 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 AC121758.2-201ENST00000553271 193 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 AL109918.3-201ENST00000603072 338 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 MIR203B-201ENST00000636080 86 ntBASIC2.54□□□□□ -2
TRIM43BA6NCK2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TRIM43BA6NCK2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRIM43BA6NCK2 Y_RNA.133-201ENST00000363428 110 ntBASIC2.53□□□□□ -2
TRIM43BA6NCK2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.53□□□□□ -2
TRIM43BA6NCK2 RNU6-975P-201ENST00000384296 105 ntBASIC2.53□□□□□ -2
TRIM43BA6NCK2 RNU6-937P-201ENST00000384325 106 ntBASIC2.53□□□□□ -2
TRIM43BA6NCK2 EDDM3CP-201ENST00000415977 425 ntBASIC2.53□□□□□ -2
TRIM43BA6NCK2 AC018634.1-201ENST00000437554 401 ntBASIC2.53□□□□□ -2
TRIM43BA6NCK2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.53□□□□□ -2
TRIM43BA6NCK2 AC245102.2-201ENST00000448956 180 ntBASIC2.53□□□□□ -2
TRIM43BA6NCK2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.53□□□□□ -2
TRIM43BA6NCK2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.53□□□□□ -2
TRIM43BA6NCK2 RNU2-34P-201ENST00000516534 121 ntBASIC2.53□□□□□ -2
TRIM43BA6NCK2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.53□□□□□ -2
TRIM43BA6NCK2 MIR5007-201ENST00000583098 95 ntBASIC2.53□□□□□ -2
TRIM43BA6NCK2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.53□□□□□ -2
TRIM43BA6NCK2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.53□□□□□ -2
TRIM43BA6NCK2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.53□□□□□ -2.01
TRIM43BA6NCK2 MIR410-201ENST00000362222 80 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 Y_RNA.47-201ENST00000362697 108 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 Y_RNA.99-201ENST00000363138 105 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 SNORD63-201ENST00000384262 68 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 U8.13-201ENST00000390842 128 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 MIR1302-3-201ENST00000408128 138 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 RNU2-20P-201ENST00000410425 191 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 IPO7P1-201ENST00000442031 636 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 DYNLT3P2-201ENST00000442517 295 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 AL139109.1-201ENST00000455491 297 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 HMGN1P10-201ENST00000474557 553 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 RNU6-295P-201ENST00000516901 104 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 AC136932.1-201ENST00000574771 208 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 MIR4300-201ENST00000581016 96 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 AC011373.1-201ENST00000607270 237 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 snoZ196.1-201ENST00000625269 89 ntBASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM43BA6NCK2 AC007336.1-201ENST00000576365 3828 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 AC092881.1-201ENST00000638218 2733 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 RNU6-418P-201ENST00000384035 107 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 RNU1-148P-201ENST00000384472 162 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 RNU6-1235P-201ENST00000384559 107 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 RNU6-57P-201ENST00000411348 103 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 CYCSP49-201ENST00000420810 319 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 AC016717.1-201ENST00000448918 286 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 AC011753.1-201ENST00000451001 220 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 RNU6-498P-201ENST00000459468 107 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 MTCO2P24-201ENST00000515611 426 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 RNU7-110P-201ENST00000516891 62 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 MIR6895-201ENST00000613497 78 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 AC004467.1-201ENST00000615678 330 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 AC091932.3-201ENST00000624223 323 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 MIR219B-201ENST00000637023 88 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 AC009487.4-201ENST00000624969 3585 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.51□□□□□ -2.01
TRIM43BA6NCK2 Y_RNA.64-201ENST00000362845 102 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 RNU6-1175P-201ENST00000365200 107 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 SNORD14D-201ENST00000384390 87 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 RNU6-21P-201ENST00000384710 107 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 Y_RNA.570-201ENST00000384750 101 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 MIR221-201ENST00000385135 110 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 SNORA26.9-201ENST00000391322 122 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 MIR1185-2-201ENST00000408687 86 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 AC139712.2-201ENST00000424302 339 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 MTCYBP9-201ENST00000431021 303 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 RPS15AP28-201ENST00000435088 386 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms