Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC024067.1-201ENST00000426199 223 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 SUMO1P2-201ENST00000452524 304 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC010598.1-201ENST00000510378 103 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 SNORA27.4-201ENST00000516650 95 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC087441.2-201ENST00000529141 262 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC026271.5-201ENST00000577873 130 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 ZNF861P-201ENST00000588126 639 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 SNORA27.1-201ENST00000362604 124 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.117-201ENST00000363294 101 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.275-201ENST00000364726 110 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-338P-201ENST00000383888 105 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 AL138827.1-201ENST00000402666 306 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 MIR1253-201ENST00000408273 105 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-855P-201ENST00000410395 104 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-651P-201ENST00000411040 105 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 AL451074.5-201ENST00000415894 435 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 RPL23AP7-203ENST00000449021 469 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 RN7SKP132-201ENST00000516001 208 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 SNORA70.12-201ENST00000516084 153 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC079600.2-201ENST00000550076 130 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 MIR4319-201ENST00000577285 85 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 AL031274.2-201ENST00000599419 203 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 BX284668.6-201ENST00000606899 438 ntBASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
IGHV4-28A0A0C4DH34 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 UBE2WP1-201ENST00000362030 340 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-271P-201ENST00000363858 105 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU1-109P-201ENST00000383960 147 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-1289P-201ENST00000384431 106 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.510-201ENST00000384511 114 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.552-201ENST00000384665 112 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 MIR181A2-201ENST00000384863 110 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-1248P-201ENST00000391096 64 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 SNORA26.7-201ENST00000391288 122 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-710P-201ENST00000410424 105 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 RN7SKP284-201ENST00000411002 343 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 HMGN2P34-201ENST00000437647 269 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 AL135790.2-201ENST00000437701 267 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC245102.2-201ENST00000448956 180 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 SNORA59A-201ENST00000459326 152 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC003982.1-202ENST00000469928 248 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 RPS27P22-201ENST00000478056 241 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC010409.1-201ENST00000487382 476 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-1041P-201ENST00000516254 102 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 AL162424.1-201ENST00000602325 221 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.15-201ENST00000611544 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.16-201ENST00000613119 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.12-201ENST00000613778 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.20-201ENST00000613956 192 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.9-201ENST00000615427 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.11-201ENST00000616345 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.2-201ENST00000616535 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.3-201ENST00000617785 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.19-201ENST00000618602 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU2-1-201ENST00000618664 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.6-201ENST00000619225 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.5-201ENST00000619465 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 U2.10-201ENST00000620268 191 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.99□□□□□ -2.09
IGHV4-28A0A0C4DH34 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 MIR26A1-201ENST00000362205 77 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-1164P-201ENST00000364428 107 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.257-201ENST00000364596 102 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.269-201ENST00000364685 89 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNA5SP184-201ENST00000411071 108 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC108059.2-201ENST00000434626 151 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 RPS29P6-201ENST00000438196 145 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 SNORD109B-201ENST00000458961 67 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 SNORD109A-201ENST00000459128 67 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC011406.1-201ENST00000512440 370 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNA5SP20-201ENST00000515976 84 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 MIR6852-201ENST00000621699 66 ntBASIC1.98□□□□□ -2.09
IGHV4-28A0A0C4DH34 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-859P-201ENST00000362728 107 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms