Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-827P-201ENST00000365553 106 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 SNORD14.1-201ENST00000365609 90 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR562-201ENST00000384894 95 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR1298-201ENST00000408783 112 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 MRPS10P1-201ENST00000448483 130 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR2115-201ENST00000516657 100 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 AC023442.1-201ENST00000531247 422 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 AP002004.2-201ENST00000531656 154 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 AC020891.4-201ENST00000605745 93 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 AC006157.1-201ENST00000611750 366 ntBASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.54□□□□□ -2.5
TRAV1-2A0A0B4J238 AC099786.3-201ENST00000565735 1410 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6-161P-201ENST00000363051 106 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 SNORD14C-201ENST00000365382 88 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6-46P-201ENST00000383860 107 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR558-201ENST00000384920 94 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 MTCYBP36-201ENST00000404146 440 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6-387P-201ENST00000411331 105 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 MTND4LP11-201ENST00000422184 280 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC015818.7-201ENST00000428754 109 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC087499.7-201ENST00000441958 109 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC079781.2-201ENST00000446424 169 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 RPS29P27-201ENST00000463711 170 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC022616.6-201ENST00000520479 119 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC012433.1-201ENST00000588916 398 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC087683.1-201ENST00000591187 441 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR548AZ-201ENST00000616567 95 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC139792.3-201ENST00000623525 224 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 AC019226.2-201ENST00000625973 424 ntBASIC-0.55□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU4-1-201ENST00000363925 141 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 AL355143.1-201ENST00000407101 841 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 HMGN2P22-201ENST00000427588 175 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 RPL17P35-201ENST00000432217 549 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU7-182P-201ENST00000459009 62 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 AC091021.1-201ENST00000468051 388 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6-323P-201ENST00000521915 107 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 MTND2P38-201ENST00000522536 667 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR4771-2-201ENST00000577758 74 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR4771-1-201ENST00000582617 74 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 AC120024.3-201ENST00000603167 156 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 AC104260.1-201ENST00000616660 539 ntBASIC-0.56□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR377-201ENST00000362145 69 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 RNA5SP98-201ENST00000363158 137 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 SNORD45.3-201ENST00000363836 72 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 BTBD7P2-201ENST00000441962 620 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 MTND1P17-201ENST00000448961 204 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AL031274.1-201ENST00000450334 232 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AC079354.2-201ENST00000453523 154 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 SNORD65B-201ENST00000459126 73 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 SNORD126-201ENST00000459475 77 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 MTCO2P6-201ENST00000463134 685 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AC091951.3-201ENST00000504093 246 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AC091133.4-201ENST00000511142 308 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6-751P-201ENST00000516382 101 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 RNA5SP285-201ENST00000516619 119 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AL355375.2-201ENST00000574825 175 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AC240442.1-201ENST00000616055 283 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR2909-201ENST00000617113 69 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AC138649.3-201ENST00000622154 254 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AC006435.5-201ENST00000624486 112 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR4251-201ENST00000635819 61 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 AL445984.1-201ENST00000637834 659 ntBASIC-0.57□□□□□ -2.5
TRAV1-2A0A0B4J238 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 SNORA72.1-201ENST00000363485 129 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AC117470.1-201ENST00000381974 330 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 RNU6-187P-201ENST00000384139 106 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 SNORA32.3-201ENST00000384772 121 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR196A2-201ENST00000385189 110 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR516B2-201ENST00000385190 85 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR136-201ENST00000385207 82 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 MIR760-201ENST00000390220 80 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 RNA5SP300-201ENST00000391197 107 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AC098592.1-201ENST00000419352 333 ntBASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.58□□□□□ -2.5
TRAV1-2A0A0B4J238 AC137499.1-201ENST00000427602 88 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms