Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC187A0A096LP49 MIR1294-201ENST00000408503 142 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 RNU6-1001P-201ENST00000411265 100 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 AC003685.2-201ENST00000422795 395 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 NDUFB4P10-201ENST00000452541 359 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 RNU7-26P-201ENST00000458980 63 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 AC091959.1-201ENST00000495857 238 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CCDC187A0A096LP49 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.56□□□□□ -2
CCDC187A0A096LP49 SNORD53-201ENST00000579969 78 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.56□□□□□ -2
CCDC187A0A096LP49 AC023043.3-201ENST00000593113 385 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 AC090115.4-201ENST00000609970 188 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CCDC187A0A096LP49 Z82209.1-201ENST00000422141 2135 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC187A0A096LP49 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.56□□□□□ -2
CCDC187A0A096LP49 Y_RNA.179-201ENST00000363844 90 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 RNU6-944P-201ENST00000364023 107 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 RNU6-793P-201ENST00000384233 104 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 RNU6-1145P-201ENST00000384246 107 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 RNU6-1081P-201ENST00000384537 107 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 SNORA67.4-201ENST00000384688 142 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 RNU6-1072P-201ENST00000384703 107 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 RNU6-443P-201ENST00000384780 107 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 MIR181B1-201ENST00000385240 110 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 SNORD12B-201ENST00000410433 91 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 RNU2-61P-201ENST00000411069 191 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 MTCO1P5-201ENST00000433573 344 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 AC004386.2-201ENST00000441858 148 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.55□□□□□ -2
CCDC187A0A096LP49 AC074133.1-201ENST00000515696 183 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 RNU6-1219P-201ENST00000516143 112 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 CYCSP23-201ENST00000519781 313 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.55□□□□□ -2
CCDC187A0A096LP49 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.55□□□□□ -2
CCDC187A0A096LP49 DEFB131C-201ENST00000528817 165 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.55□□□□□ -2
CCDC187A0A096LP49 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.55□□□□□ -2
CCDC187A0A096LP49 AC108706.1-201ENST00000611053 297 ntBASIC2.55□□□□□ -2
CCDC187A0A096LP49 AL355596.1-201ENST00000565399 3996 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.54□□□□□ -2
CCDC187A0A096LP49 RNU6-961P-201ENST00000363893 105 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 RNA5SP125-201ENST00000364843 120 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 SNORD50B-201ENST00000364995 70 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 RNU5A-5P-201ENST00000411054 116 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 RNU5E-9P-201ENST00000411164 104 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 HMGN2P35-201ENST00000412164 270 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.54□□□□□ -2
CCDC187A0A096LP49 AC009237.7-201ENST00000447357 229 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 AC003982.1-202ENST00000469928 248 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 RNU1-41P-201ENST00000516161 162 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 RNY3P16-201ENST00000516338 101 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 RNU1-48P-201ENST00000516400 162 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 SNORA27.4-201ENST00000516650 95 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 RNU2-44P-201ENST00000516795 194 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 SNORA48.11-201ENST00000517015 89 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.54□□□□□ -2
CCDC187A0A096LP49 MIR5006-201ENST00000583027 110 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 CTSLP2-204ENST00000629029 392 ntBASIC2.54□□□□□ -2
CCDC187A0A096LP49 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCDC187A0A096LP49 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC187A0A096LP49 MIR410-201ENST00000362222 80 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 Y_RNA.8-201ENST00000362353 102 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 VTRNA1-1-201ENST00000363120 99 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 SNORA38-201ENST00000363946 132 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 Y_RNA.217-201ENST00000364214 105 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 RNU6-1289P-201ENST00000384431 106 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 Y_RNA.580-201ENST00000391004 95 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 Y_RNA.590-201ENST00000410140 107 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 Y_RNA.595-201ENST00000410403 105 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.53□□□□□ -2
CCDC187A0A096LP49 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.53□□□□□ -2
CCDC187A0A096LP49 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.53□□□□□ -2
CCDC187A0A096LP49 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.53□□□□□ -2
CCDC187A0A096LP49 AC010095.1-201ENST00000443543 144 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 UQCRBP2-201ENST00000447827 297 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 AC007395.1-201ENST00000451333 677 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 Y_RNA.641-201ENST00000459414 105 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 AC091179.3-201ENST00000474761 144 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 UBL5P3-201ENST00000475112 231 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.53□□□□□ -2
CCDC187A0A096LP49 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.53□□□□□ -2
CCDC187A0A096LP49 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.53□□□□□ -2
CCDC187A0A096LP49 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 RNU6-966P-201ENST00000516479 104 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 RNU6-344P-201ENST00000516635 111 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 RPL21P9-201ENST00000556149 474 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 AP001485.1-201ENST00000604799 199 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.53□□□□□ -2
CCDC187A0A096LP49 MTND5P35-201ENST00000557537 1720 ntBASIC2.53□□□□□ -2
CCDC187A0A096LP49 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 SNORA25.1-201ENST00000362326 128 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 U8.2-201ENST00000363156 134 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 RNU6-626P-201ENST00000363354 107 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 Y_RNA.230-201ENST00000364348 109 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 RNU6-20P-201ENST00000384106 107 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms