Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNU6-743P-201ENST00000364151 106 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-290P-201ENST00000365212 101 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.331-201ENST00000365267 102 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.510-201ENST00000384511 114 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-1235P-201ENST00000384559 107 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-498P-201ENST00000459468 107 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 HMGB3P17-201ENST00000504195 649 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 AC023157.2-201ENST00000540596 141 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 snoZ196.1-201ENST00000625269 89 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 FO624990.1-201ENST00000636373 85 ntBASIC2.63□□□□□ -1.99
PCDHA3Q9Y5H8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.243-201ENST00000364481 109 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.286-201ENST00000364813 102 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-505P-201ENST00000384427 107 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 AC139712.2-201ENST00000424302 339 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 CR769767.1-201ENST00000436337 346 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 MTCO1P44-201ENST00000441935 243 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 PRELID3BP1-201ENST00000457142 540 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 RNU7-26P-201ENST00000458980 63 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-1132P-201ENST00000459214 107 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-221P-201ENST00000459541 99 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 AC107222.1-201ENST00000510899 637 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-991P-201ENST00000516168 107 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-1338P-201ENST00000516328 91 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 AC087441.2-201ENST00000529141 262 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 GTF3AP2-201ENST00000557014 266 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 AC008749.1-201ENST00000597650 306 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 AC006006.1-201ENST00000603082 144 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 AC006380.1-201ENST00000603598 186 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 AL033523.1-201ENST00000605153 153 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 AC006001.4-201ENST00000622243 395 ntBASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PCDHA3Q9Y5H8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 AL391987.6-201ENST00000305671 199 ntBASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-1072P-201ENST00000384703 107 ntBASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-443P-201ENST00000384780 107 ntBASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 AL357134.1-201ENST00000445848 426 ntBASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 RNA5SP402-201ENST00000517148 110 ntBASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 CYCSP26-201ENST00000534107 320 ntBASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 MIR6852-201ENST00000621699 66 ntBASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.61□□□□□ -1.99
PCDHA3Q9Y5H8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-859P-201ENST00000362728 107 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 RNA5SP393-201ENST00000363423 117 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-326P-201ENST00000365480 107 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-418P-201ENST00000384035 107 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.500-201ENST00000384466 111 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.562-201ENST00000384695 113 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 EDDM3CP-201ENST00000415977 425 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 SUMO1P2-201ENST00000452524 304 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 SNORD109B-201ENST00000458961 67 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 SNORD109A-201ENST00000459128 67 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 AC010531.2-201ENST00000465012 153 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 RNA5SP356-201ENST00000515972 94 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-155P-201ENST00000516347 100 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-966P-201ENST00000516479 104 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 AC025754.2-201ENST00000606491 432 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 AC005828.6-201ENST00000606610 232 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 U6.115-201ENST00000636045 103 ntBASIC2.6□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.14-201ENST00000362415 103 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.136-201ENST00000363444 102 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.237-201ENST00000364439 102 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.569-201ENST00000384749 103 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 MIR27B-201ENST00000385129 97 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 SNORA53-201ENST00000391141 249 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 AC016717.1-201ENST00000448918 286 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 MTND4LP30-201ENST00000454092 297 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 DEFB108E-201ENST00000524692 240 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 IGHVIII-44-202ENST00000636235 289 ntBASIC2.59□□□□□ -1.99
PCDHA3Q9Y5H8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 MIR340-201ENST00000362125 95 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 MIR21-201ENST00000362134 72 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.16-201ENST00000362421 102 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 SNORD114-7-201ENST00000362520 77 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.99-201ENST00000363138 105 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 SNORA38-201ENST00000363946 132 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.350-201ENST00000365409 98 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.361-201ENST00000365515 120 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 Y_RNA.383-201ENST00000383855 97 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 U3.40-201ENST00000408706 208 ntBASIC2.58□□□□□ -2
PCDHA3Q9Y5H8 RN7SKP284-201ENST00000411002 343 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms