Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 AC004223.2-201ENST00000590309 544 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 HULC.1-201ENST00000612720 240 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 SNORD115-8-201ENST00000363856 82 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 SNORD115-38-201ENST00000365037 82 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-784P-201ENST00000384330 106 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 SNORD89-201ENST00000390981 114 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-584P-201ENST00000410350 95 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 BX295541.1-201ENST00000417774 250 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 CYCSP46-201ENST00000423569 204 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 AC092423.1-201ENST00000430165 186 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 CCDC34P1-201ENST00000507441 517 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 AC091133.4-201ENST00000511142 308 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 RNA5SP54-201ENST00000516951 92 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 MTND1P35-201ENST00000526739 508 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 AC087683.2-201ENST00000611384 326 ntBASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 FER-210ENST00000628534 558 ntTSL 5 BASIC0.32□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-1266P-201ENST00000362794 105 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-1120P-201ENST00000362988 108 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 Y_RNA.100-201ENST00000363141 102 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-1329P-201ENST00000365664 107 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 RNA5SP219-201ENST00000390940 113 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 RPL23AP50-201ENST00000434149 455 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 AC104332.1-201ENST00000440471 797 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 RPL23AP75-201ENST00000491601 451 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-1129P-201ENST00000515964 104 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 RNU7-28P-201ENST00000516759 62 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 AC131055.1-201ENST00000584626 316 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 MIR4438-201ENST00000585271 93 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 MIR6079-201ENST00000635807 62 ntBASIC0.31□□□□□ -2.36
HDGFL3Q9Y3E1 AL589743.1-201ENST00000551932 2712 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 RNA5SP264-201ENST00000363115 107 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-137P-201ENST00000363680 108 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 Y_RNA.265-201ENST00000364677 108 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 Y_RNA.560-201ENST00000384689 102 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 RNA5SP193-201ENST00000410353 107 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 AL162725.1-201ENST00000435405 301 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 MRPS10P1-201ENST00000448483 130 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 RNU7-12P-201ENST00000516030 62 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 RN7SKP12-201ENST00000516275 143 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 SNORD111.1-201ENST00000516421 86 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 MTND4LP26-201ENST00000518144 282 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 AC087854.1-201ENST00000519706 414 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 AP003716.2-201ENST00000528260 108 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 CPDP1-201ENST00000579660 283 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 MIR3192-201ENST00000584920 77 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 AC234772.3-201ENST00000602277 528 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 AL117336.2-201ENST00000602435 335 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 uc_338.34-201ENST00000617467 174 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 MIR6515-201ENST00000619843 57 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 AC006435.5-201ENST00000624486 112 ntBASIC0.3□□□□□ -2.36
HDGFL3Q9Y3E1 MIRLET7C-201ENST00000362160 84 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 Y_RNA.796-201ENST00000364268 102 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 SNORD87-201ENST00000364849 89 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 Y_RNA.799-201ENST00000364992 102 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 snoU13.18-201ENST00000459483 104 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 MTND4P7-201ENST00000523876 130 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 AC104576.1-201ENST00000524225 88 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 AC109810.1-201ENST00000534066 224 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 MIR4424-201ENST00000585257 86 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 Z83818.1-201ENST00000603584 150 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 MIR8076-201ENST00000611401 83 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 AC068787.1-201ENST00000623908 691 ntBASIC0.29□□□□□ -2.36
HDGFL3Q9Y3E1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 RNU1-119P-201ENST00000391122 165 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 AL663109.1-201ENST00000411498 844 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 MTATP6P18-201ENST00000417994 673 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 MTCYBP8-201ENST00000422855 651 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 AC244098.3-201ENST00000424803 96 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 MTCYBP10-201ENST00000424905 650 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 AC093019.1-201ENST00000443135 252 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 MTCO1P19-201ENST00000443487 500 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 SNORD65B-201ENST00000459126 73 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 MTND3P3-201ENST00000505004 126 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 SCARNA1-201ENST00000517138 166 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 AC093913.1-201ENST00000614178 329 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 SEPT14P17-201ENST00000617978 177 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 7SK.10-201ENST00000621414 298 ntBASIC0.28□□□□□ -2.36
HDGFL3Q9Y3E1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms