Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-793P-201ENST00000384233 104 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-541P-201ENST00000384709 110 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 MIR515-2-201ENST00000384883 83 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 MIR515-1-201ENST00000384884 83 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 MIR548B-201ENST00000385247 97 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-360P-201ENST00000390944 104 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 RNU1-139P-201ENST00000391307 165 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.619-201ENST00000410951 90 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AC074085.1-201ENST00000413598 418 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 EBAG9P1-201ENST00000418955 543 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AC008134.1-201ENST00000420943 193 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 USMG5P1-201ENST00000425964 177 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 MTND3P23-201ENST00000431980 347 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AL445305.1-201ENST00000432577 575 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 HSPE1P9-201ENST00000440046 311 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AP000870.1-201ENST00000472927 406 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AC046134.1-201ENST00000514454 666 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AC093303.1-201ENST00000514549 295 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-1146P-201ENST00000516282 102 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 RNA5SP481-201ENST00000516814 122 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 CBX3P8-201ENST00000532412 525 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AC011712.1-201ENST00000588959 234 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AP001485.1-201ENST00000604799 199 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 PRR13P7-201ENST00000605538 430 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AC005014.2-201ENST00000607795 599 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AC006001.4-201ENST00000622243 395 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 AL359757.2-201ENST00000624309 274 ntBASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.67-201ENST00000362870 100 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 SNORA33-201ENST00000363664 130 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.279-201ENST00000364763 95 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 SNORD87-201ENST00000364849 89 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.415-201ENST00000384012 112 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 MIR1185-2-201ENST00000408687 86 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.594-201ENST00000410373 140 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 AP1B1P2-201ENST00000416196 106 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 RPS3AP52-201ENST00000435639 297 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 AC009474.2-201ENST00000451383 136 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-1114P-201ENST00000516022 107 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 SNORA77B-201ENST00000578179 125 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 AL355802.3-201ENST00000607571 545 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 AC100812.1-201ENST00000607622 580 ntBASIC1.19□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.48-201ENST00000362710 103 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-414P-201ENST00000363705 104 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 SNORA7.1-201ENST00000363750 139 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.248-201ENST00000364501 109 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-1050P-201ENST00000410388 107 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 RPL30P13-201ENST00000418873 348 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 JTBP1-201ENST00000441314 247 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 AC107399.1-201ENST00000451226 265 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.670-201ENST00000516255 105 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.706-201ENST00000516933 99 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.708-201ENST00000516950 96 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 AC105029.1-201ENST00000520250 669 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 AC024995.1-201ENST00000523014 93 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 AP003033.1-201ENST00000527244 415 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 AL121579.1-201ENST00000555129 305 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 MIR4422-201ENST00000581938 83 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 MIR4769-201ENST00000584126 77 ntBASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAPPC4Q9Y296 MIR378A-201ENST00000362177 66 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.88-201ENST00000363029 99 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-727P-201ENST00000363592 107 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.166-201ENST00000363730 102 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.179-201ENST00000363844 90 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-1240P-201ENST00000365155 104 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-767P-201ENST00000384132 107 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-281P-201ENST00000384212 103 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.473-201ENST00000384333 102 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 Y_RNA.482-201ENST00000384377 111 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-417P-201ENST00000384712 107 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 FGF7P8-201ENST00000402994 292 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 AL161935.2-201ENST00000414627 60 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 BTF3P4-201ENST00000418852 495 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 USP9YP16-201ENST00000430287 407 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 FTH1P12-201ENST00000432137 551 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 USP9YP23-201ENST00000455085 407 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 RPL31P58-201ENST00000469001 379 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 RPL36AP21-201ENST00000490372 323 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 AC116353.2-201ENST00000505332 712 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 HMGN1P13-201ENST00000505795 138 ntBASIC1.17□□□□□ -2.22
TRAPPC4Q9Y296 RNU6-237P-201ENST00000515985 71 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms