Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SNORD115-38-201ENST00000365037 82 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 SNORA25.9-201ENST00000365087 128 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CDH9Q9ULB4 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 RNA5SP504-201ENST00000410676 117 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.12□□□□□ -2.23
CDH9Q9ULB4 AL353572.1-201ENST00000442490 417 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 AL606517.2-201ENST00000442855 241 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 MTND1P11-201ENST00000456661 876 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 RNU7-187P-201ENST00000458985 68 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 AL133373.1-201ENST00000497098 94 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 RN7SKP88-201ENST00000516847 250 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 MIR3664-201ENST00000579074 99 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 7SK.8-201ENST00000612110 250 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 DISC2.1-201ENST00000612827 205 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 AC090517.2-201ENST00000614966 680 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 7SK.11-201ENST00000615477 250 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 7SK.13-201ENST00000622040 250 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 U6.108-201ENST00000637764 58 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 RNY4P14-201ENST00000363656 96 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 RNU6-790P-201ENST00000384479 105 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 MIR181A1-201ENST00000385026 110 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 AL590002.1-201ENST00000406554 418 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH9Q9ULB4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.11□□□□□ -2.23
CDH9Q9ULB4 AC010154.1-201ENST00000425857 269 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 MTCO3P18-201ENST00000440206 761 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.11□□□□□ -2.23
CDH9Q9ULB4 AC079354.2-201ENST00000453523 154 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.11□□□□□ -2.23
CDH9Q9ULB4 RNU6-1198P-201ENST00000516904 67 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 MIR3672-201ENST00000584290 82 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 AL138726.1-201ENST00000614873 333 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH9Q9ULB4 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH9Q9ULB4 AC099654.5-201ENST00000636479 350 ntBASIC1.11□□□□□ -2.23
CDH9Q9ULB4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH9Q9ULB4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CDH9Q9ULB4 SNORD115-32-201ENST00000364079 82 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 RNU4-9P-201ENST00000364951 139 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 MIR32-201ENST00000384965 70 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 RNU6-332P-201ENST00000391193 108 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 AL356776.1-201ENST00000406574 447 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 AL590632.1-201ENST00000424289 371 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 NDUFA5P4-201ENST00000436704 385 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 AC103851.1-201ENST00000506833 274 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 SNORA31.10-201ENST00000516482 106 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 RNU6-314P-201ENST00000516574 104 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 SUMO2P16-201ENST00000519475 264 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.1□□□□□ -2.23
CDH9Q9ULB4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.1□□□□□ -2.23
CDH9Q9ULB4 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 AC022217.4-201ENST00000604389 163 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 MIR6504-201ENST00000613520 61 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 AC090617.10-201ENST00000624308 134 ntBASIC1.1□□□□□ -2.23
CDH9Q9ULB4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.1□□□□□ -2.23
CDH9Q9ULB4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CDH9Q9ULB4 Y_RNA.151-201ENST00000363566 112 ntBASIC1.09□□□□□ -2.23
CDH9Q9ULB4 Y_RNA.450-201ENST00000384198 113 ntBASIC1.09□□□□□ -2.23
CDH9Q9ULB4 RNU6-95P-201ENST00000384697 107 ntBASIC1.09□□□□□ -2.23
CDH9Q9ULB4 MIR499A-201ENST00000384903 122 ntBASIC1.09□□□□□ -2.23
CDH9Q9ULB4 RN7SKP200-201ENST00000410564 320 ntBASIC1.09□□□□□ -2.23
CDH9Q9ULB4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.09□□□□□ -2.23
CDH9Q9ULB4 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
CDH9Q9ULB4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH9Q9ULB4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH9Q9ULB4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH9Q9ULB4 RNA5SP454-201ENST00000517231 127 ntBASIC1.09□□□□□ -2.23
CDH9Q9ULB4 AC109635.3-201ENST00000529536 185 ntBASIC1.09□□□□□ -2.23
CDH9Q9ULB4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH9Q9ULB4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.09□□□□□ -2.23
CDH9Q9ULB4 MIR3942-201ENST00000585264 109 ntBASIC1.09□□□□□ -2.23
CDH9Q9ULB4 AC006504.8-201ENST00000621046 635 ntBASIC1.09□□□□□ -2.23
CDH9Q9ULB4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.09□□□□□ -2.23
CDH9Q9ULB4 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.89-201ENST00000363031 102 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 RNU6-1252P-201ENST00000363054 104 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.373-201ENST00000365600 103 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.402-201ENST00000383972 102 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CDH9Q9ULB4 Z82188.1-201ENST00000436709 154 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 PGBD4P5-201ENST00000445958 426 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 NDUFB4P10-201ENST00000452541 359 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 PCMTD1P1-201ENST00000455560 355 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 MTCO2P30-201ENST00000503662 364 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.655-201ENST00000515919 96 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 SNORA25.14-201ENST00000516481 132 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 RNU6-58P-201ENST00000517143 103 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 ZNF519P2-201ENST00000557032 169 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.08□□□□□ -2.24
CDH9Q9ULB4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 MIR8054-201ENST00000620877 86 ntBASIC1.08□□□□□ -2.24
CDH9Q9ULB4 U3.8-201ENST00000363675 217 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 SNORD114-27-201ENST00000363766 70 ntBASIC1.07□□□□□ -2.24
CDH9Q9ULB4 Y_RNA.212-201ENST00000364177 102 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms