Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNY1-201ENST00000364228 113 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 SNORD56.5-201ENST00000364281 72 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 Y_RNA.269-201ENST00000364685 89 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 RNU6-200P-201ENST00000364743 107 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 RNU2-61P-201ENST00000411069 191 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX41Q9UJV9 AC092427.1-202ENST00000430569 476 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 RPS29P6-201ENST00000438196 145 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 RNU6-191P-201ENST00000516295 94 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX41Q9UJV9 MIR4672-201ENST00000583126 81 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX41Q9UJV9 AC006023.1-201ENST00000603944 259 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX41Q9UJV9 AC007318.2-201ENST00000620999 243 ntBASIC3.36□□□□□ -1.87
DDX41Q9UJV9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX41Q9UJV9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX41Q9UJV9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX41Q9UJV9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
DDX41Q9UJV9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
DDX41Q9UJV9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.35□□□□□ -1.87
DDX41Q9UJV9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX41Q9UJV9 RNA5SP125-201ENST00000364843 120 ntBASIC3.35□□□□□ -1.87
DDX41Q9UJV9 RNU6-1235P-201ENST00000384559 107 ntBASIC3.35□□□□□ -1.87
DDX41Q9UJV9 AL139095.1-201ENST00000404326 391 ntBASIC3.35□□□□□ -1.87
DDX41Q9UJV9 RNU6-57P-201ENST00000411348 103 ntBASIC3.35□□□□□ -1.87
DDX41Q9UJV9 AC008134.1-201ENST00000420943 193 ntBASIC3.35□□□□□ -1.87
DDX41Q9UJV9 RNU6-498P-201ENST00000459468 107 ntBASIC3.35□□□□□ -1.87
DDX41Q9UJV9 RNU6-221P-201ENST00000459541 99 ntBASIC3.35□□□□□ -1.87
DDX41Q9UJV9 RNA5SP367-201ENST00000516557 118 ntBASIC3.35□□□□□ -1.87
DDX41Q9UJV9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
DDX41Q9UJV9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX41Q9UJV9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX41Q9UJV9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX41Q9UJV9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
DDX41Q9UJV9 SNORD14D-201ENST00000384390 87 ntBASIC3.34□□□□□ -1.87
DDX41Q9UJV9 RNU6-1289P-201ENST00000384431 106 ntBASIC3.34□□□□□ -1.87
DDX41Q9UJV9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.34□□□□□ -1.87
DDX41Q9UJV9 Y_RNA.700-201ENST00000516806 100 ntBASIC3.34□□□□□ -1.87
DDX41Q9UJV9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX41Q9UJV9 GTF3AP2-201ENST00000557014 266 ntBASIC3.34□□□□□ -1.87
DDX41Q9UJV9 RPL12P50-201ENST00000603116 116 ntBASIC3.34□□□□□ -1.87
DDX41Q9UJV9 AC025754.2-201ENST00000606491 432 ntBASIC3.34□□□□□ -1.87
DDX41Q9UJV9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
DDX41Q9UJV9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.200-201ENST00000364018 102 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 RNU6-418P-201ENST00000384035 107 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 RNU6-851P-201ENST00000384565 107 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 AC123900.1-201ENST00000420390 96 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 AC009238.1-201ENST00000442165 424 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 AC009237.6-201ENST00000446969 424 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 AC016717.1-201ENST00000448918 286 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 SNORA4.4-201ENST00000515921 135 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 RN7SKP132-201ENST00000516001 208 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 RNU6-667P-201ENST00000517186 102 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 AC009127.3-201ENST00000570531 403 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 MIR4643-201ENST00000577473 78 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
DDX41Q9UJV9 MIR3124-201ENST00000582636 67 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 ELOCP29-201ENST00000588193 334 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 AC013412.1-201ENST00000610687 192 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 U4atac.1-201ENST00000618345 95 ntBASIC3.33□□□□□ -1.88
DDX41Q9UJV9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.82-201ENST00000363000 102 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.92-201ENST00000363043 102 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.122-201ENST00000363331 96 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 RNU6-271P-201ENST00000363858 105 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.235-201ENST00000364412 102 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.306-201ENST00000365015 102 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.312-201ENST00000365089 102 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.322-201ENST00000365151 102 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 RNU6-662P-201ENST00000384253 104 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 AL451074.5-201ENST00000415894 435 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.650-201ENST00000459002 102 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 AC093259.1-201ENST00000509755 300 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 RNA5SP356-201ENST00000515972 94 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.777-201ENST00000516982 102 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 AC090616.3-201ENST00000582184 217 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.771-201ENST00000598668 102 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 AL442067.1-201ENST00000613261 223 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.789-201ENST00000622480 102 ntBASIC3.32□□□□□ -1.88
DDX41Q9UJV9 AC096644.4-201ENST00000563417 2912 ntBASIC3.31□□□□□ -1.88
DDX41Q9UJV9 SNORD114-7-201ENST00000362520 77 ntBASIC3.31□□□□□ -1.88
DDX41Q9UJV9 SNORA25B-201ENST00000365507 128 ntBASIC3.31□□□□□ -1.88
DDX41Q9UJV9 MIR1298-201ENST00000408783 112 ntBASIC3.31□□□□□ -1.88
DDX41Q9UJV9 AC104389.3-201ENST00000445629 235 ntBASIC3.31□□□□□ -1.88
DDX41Q9UJV9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX41Q9UJV9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX41Q9UJV9 AC010598.1-201ENST00000510378 103 ntBASIC3.31□□□□□ -1.88
DDX41Q9UJV9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.31□□□□□ -1.88
DDX41Q9UJV9 RNU6-138P-201ENST00000515952 107 ntBASIC3.31□□□□□ -1.88
DDX41Q9UJV9 RNU6-991P-201ENST00000516168 107 ntBASIC3.31□□□□□ -1.88
DDX41Q9UJV9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX41Q9UJV9 AC005828.6-201ENST00000606610 232 ntBASIC3.31□□□□□ -1.88
DDX41Q9UJV9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
DDX41Q9UJV9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.83-201ENST00000363005 113 ntBASIC3.3□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.199-201ENST00000364014 102 ntBASIC3.3□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.292-201ENST00000364904 97 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms