Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 MIR6075-201ENST00000620782 95 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 AL355596.1-201ENST00000565399 3996 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
VTI1BQ9UEU0 RNU6-1205P-201ENST00000363625 106 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 Y_RNA.293-201ENST00000364908 93 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 RNU6-117P-201ENST00000365415 107 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 MIR1253-201ENST00000408273 105 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 EDDM3CP-201ENST00000415977 425 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 AC060773.1-201ENST00000421698 310 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 RNU7-115P-201ENST00000516433 55 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 AL137100.2-201ENST00000555786 315 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 MIR4438-201ENST00000585271 93 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 U6.106-201ENST00000636360 105 ntBASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
VTI1BQ9UEU0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 AC073346.2-201ENST00000624724 2058 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 RNU1-22P-201ENST00000363334 158 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 SNORD56.5-201ENST00000364281 72 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 SNORA8.3-201ENST00000384679 139 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 Y_RNA.571-201ENST00000384753 98 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 SNORA26.7-201ENST00000391288 122 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 SUMO1P3-201ENST00000439961 304 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 AC097462.1-201ENST00000514125 324 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 RNU6-1146P-201ENST00000516282 102 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 RNU1-143P-201ENST00000516296 146 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 U1.23-201ENST00000610293 146 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 uc_338.1-201ENST00000612113 180 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 Y_RNA.802-201ENST00000614892 130 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 RNU1-68P-201ENST00000615382 146 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 U1.39-201ENST00000621562 146 ntBASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.26□□□□□ -1.89
VTI1BQ9UEU0 Y_RNA.7-201ENST00000362352 102 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 Y_RNA.240-201ENST00000364469 95 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 U8.7-201ENST00000364940 136 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 RNU6-1323P-201ENST00000384025 107 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 Y_RNA.464-201ENST00000384282 110 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 MIR1262-201ENST00000408276 93 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 AL353689.1-201ENST00000438895 199 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 AC115115.1-201ENST00000449927 248 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 RNU1-131P-201ENST00000458943 161 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 RN7SL293P-201ENST00000481765 281 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 AC092185.1-201ENST00000491371 97 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 AC011406.1-201ENST00000512440 370 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 Y_RNA.662-201ENST00000516028 97 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 RNU6-1278P-201ENST00000516130 107 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 RNU6-63P-201ENST00000516690 95 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 AP003357.1-201ENST00000604497 148 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 AC005972.2-201ENST00000604690 348 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 AL356274.2-201ENST00000624379 3752 ntBASIC3.25□□□□□ -1.89
VTI1BQ9UEU0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 SNORA71.3-201ENST00000362582 128 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 snoU2-30.2-201ENST00000362805 70 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 RNU6-144P-201ENST00000383951 107 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 RNU6-160P-201ENST00000384591 107 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 MIR23B-201ENST00000384832 97 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 MIR670-201ENST00000390142 98 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 MIR526A2-201ENST00000390198 65 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 SNORD17-201ENST00000390930 237 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 RNU6-381P-201ENST00000391259 108 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 AL135786.1-201ENST00000415892 214 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 AC244505.4-201ENST00000434905 287 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 HMGN2P34-201ENST00000437647 269 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 SSXP5-201ENST00000443473 287 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 RNU7-26P-201ENST00000458980 63 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 AC117454.1-201ENST00000491120 168 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 FCF1P8-201ENST00000510322 597 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 RNU6-1219P-201ENST00000516143 112 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 RNU7-116P-201ENST00000516940 62 ntBASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VTI1BQ9UEU0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 RNU4-35P-201ENST00000362588 141 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 Y_RNA.121-201ENST00000363309 113 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 RNA5SP50-201ENST00000363731 107 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 RNU6-1072P-201ENST00000384703 107 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 RNU6-443P-201ENST00000384780 107 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 MIR7-3-201ENST00000384898 110 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 MIR626-201ENST00000385032 94 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 RN7SKP284-201ENST00000411002 343 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 AL451074.5-201ENST00000415894 435 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 AC025518.1-201ENST00000479856 347 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 AC074198.2-201ENST00000508153 258 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 AC021269.2-201ENST00000532318 330 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 AC015720.1-201ENST00000565251 277 ntBASIC3.23□□□□□ -1.89
VTI1BQ9UEU0 AC127455.1-201ENST00000565496 145 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms