Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AL031274.2-201ENST00000599419 203 ntBASIC2.67□□□□□ -1.98
MKS1Q9NXB0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.67□□□□□ -1.98
MKS1Q9NXB0 IGHVIII-44-202ENST00000636235 289 ntBASIC2.67□□□□□ -1.98
MKS1Q9NXB0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.67□□□□□ -1.98
MKS1Q9NXB0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.66□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.193-201ENST00000363979 102 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 RNU6-702P-201ENST00000364982 107 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 SNORA70.4-201ENST00000365509 134 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 U3.40-201ENST00000408706 208 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
MKS1Q9NXB0 AP001486.1-201ENST00000463339 476 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.668-201ENST00000516233 93 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.66□□□□□ -1.98
MKS1Q9NXB0 AC004817.2-201ENST00000561794 651 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 MIR5092-201ENST00000583139 88 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 AC005828.6-201ENST00000606610 232 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.66□□□□□ -1.98
MKS1Q9NXB0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
MKS1Q9NXB0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MKS1Q9NXB0 AC007336.1-201ENST00000576365 3828 ntBASIC2.65□□□□□ -1.98
MKS1Q9NXB0 Y_RNA.16-201ENST00000362421 102 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 RNU6-1266P-201ENST00000362794 105 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 SNORD115-3-201ENST00000363100 82 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 RNU6-1240P-201ENST00000365155 104 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 MIR29C-201ENST00000385231 88 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
MKS1Q9NXB0 AL139132.1-201ENST00000431587 344 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.65□□□□□ -1.99
MKS1Q9NXB0 SUMO1P2-201ENST00000452524 304 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 SNORD65B-201ENST00000459126 73 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 MIR4635-201ENST00000583759 79 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 SNORD14A-201ENST00000606526 91 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 AP001282.2-201ENST00000616149 309 ntBASIC2.65□□□□□ -1.99
MKS1Q9NXB0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.65□□□□□ -1.99
MKS1Q9NXB0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
MKS1Q9NXB0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
MKS1Q9NXB0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MKS1Q9NXB0 AC010615.1-201ENST00000594254 1764 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MKS1Q9NXB0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
MKS1Q9NXB0 RNA5SP374-201ENST00000362939 125 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 RNA5SP493-201ENST00000364115 91 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 Y_RNA.288-201ENST00000364854 92 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 Y_RNA.383-201ENST00000383855 97 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 Y_RNA.518-201ENST00000384552 113 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 RNA5SP21-201ENST00000410917 96 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.64□□□□□ -1.99
MKS1Q9NXB0 AC060773.1-201ENST00000421698 310 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 POLR2KP2-201ENST00000438155 177 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 RPS12P2-201ENST00000439728 269 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.64□□□□□ -1.99
MKS1Q9NXB0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.64□□□□□ -1.99
MKS1Q9NXB0 AC010598.1-201ENST00000510378 103 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 RNU6-436P-201ENST00000516171 114 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 AP000942.4-201ENST00000604811 241 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 MIR6895-201ENST00000613497 78 ntBASIC2.64□□□□□ -1.99
MKS1Q9NXB0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MKS1Q9NXB0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.64□□□□□ -1.99
MKS1Q9NXB0 AL159152.1-201ENST00000635019 2587 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MKS1Q9NXB0 RNU6-324P-201ENST00000363957 106 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 Y_RNA.361-201ENST00000365515 120 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 Y_RNA.569-201ENST00000384749 103 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
MKS1Q9NXB0 AL031003.1-201ENST00000404229 172 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 AL355796.1-201ENST00000406706 323 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.63□□□□□ -1.99
MKS1Q9NXB0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.63□□□□□ -1.99
MKS1Q9NXB0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
MKS1Q9NXB0 HMGB3P3-201ENST00000510526 400 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 RNU6-1338P-201ENST00000516328 91 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 SNORA31.11-201ENST00000516528 139 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 DEFB108E-201ENST00000524692 240 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.15-201ENST00000611544 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.16-201ENST00000613119 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.12-201ENST00000613778 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.20-201ENST00000613956 192 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.9-201ENST00000615427 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.11-201ENST00000616345 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.2-201ENST00000616535 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.3-201ENST00000617785 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.19-201ENST00000618602 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 RNU2-1-201ENST00000618664 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.6-201ENST00000619225 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.5-201ENST00000619465 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 U2.10-201ENST00000620268 191 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 MIR8057-201ENST00000620957 69 ntBASIC2.63□□□□□ -1.99
MKS1Q9NXB0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.63□□□□□ -1.99
MKS1Q9NXB0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MKS1Q9NXB0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.63□□□□□ -1.99
MKS1Q9NXB0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MKS1Q9NXB0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MKS1Q9NXB0 Y_RNA.329-201ENST00000365209 107 ntBASIC2.62□□□□□ -1.99
MKS1Q9NXB0 SNORA20B-201ENST00000384220 132 ntBASIC2.62□□□□□ -1.99
MKS1Q9NXB0 AL138827.1-201ENST00000402666 306 ntBASIC2.62□□□□□ -1.99
MKS1Q9NXB0 AL353689.1-201ENST00000438895 199 ntBASIC2.62□□□□□ -1.99
MKS1Q9NXB0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.62□□□□□ -1.99
MKS1Q9NXB0 SNORD127-201ENST00000458892 86 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms